Transcript Information: S_Transcript_343033.p1


Annotated TAIR IDAT5G07040.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2190344-2190823 | Forward length=159
E-Value2E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.28311703441681
Replicate 21.173552636038
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 21.9039871182746
Replicate 30.68029300866962
Condition 3: 24 Hour
Replicate 10.69717713267854
Replicate 20.96441751388712
Replicate 30.80495886399307


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_343033.p1 GENE.S_Transcript_343033~~S_Transcript_343033.p1 ORF type:5prime_partial len:94 (-),score=7.37,zf-RING_2|PF13639.2|1.7e-08,zf-rbx1|PF12678.3|9.1e-08,zf-C3HC4_2|PF13923.2|7.6e-06 S_Transcript_343033:41-322(-)
CCATTGTGCAAACACGTGTTCCATTGGGATTGCATTCGCCACTGGCTCCGAACCAATGCCACGTGTCCATTGTGCAGGTGCCCTCTTATATCCGCGGGGCAACTTGTTGGGTTTAACCCGACCCGCCAAGGAAGTGAAAACACTACCCAACAGCAGGAGCAAAGAAATATGGGAAGTAGCTCCTCAAATAGCAACAATAATAATTCCTCAAGATCAGAAGTGCATGTAATTGAGATTGTTCATCAAGATCCATCTTCCAGTATTAGTAGTAATACTTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_343033.p1 GENE.S_Transcript_343033~~S_Transcript_343033.p1 ORF type:5prime_partial len:94 (-),score=7.37,zf-RING_2|PF13639.2|1.7e-08,zf-rbx1|PF12678.3|9.1e-08,zf-C3HC4_2|PF13923.2|7.6e-06 S_Transcript_343033:41-322(-)
PLCKHVFHWDCIRHWLRTNATCPLCRCPLISAGQLVGFNPTRQGSENTTQQQEQRNMGSSSSNSNNNNSSRSEVHVIEIVHQDPSSSISSNTS*

Click here to download the sequence:
Link to NCBI Protein BLAST