Transcript Information: S_Transcript_343044.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value6E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7169678216246
Replicate 20.28468115558084
Replicate 30.47594157635098
Condition 2: 8 Hour
Replicate 10.96308214335439
Replicate 20.28866901470615
Replicate 30.55008638980597
Condition 3: 24 Hour
Replicate 10.42280419659215
Replicate 21.6083995312246
Replicate 31.1390600699085


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_343044.p1 GENE.S_Transcript_343044~~S_Transcript_343044.p1 ORF type:5prime_partial len:155 (-),score=3.82,zf-RVT|PF13966.2|6.5e-06,zf-RVT|PF13966.2|1.9e+03 S_Transcript_343044:151-615(-)
TGGACTTTGACTTTGGGGAAAATTAATGCCAATGATATGAGGCGGTGTAGGAGGCCTACTTGGTGTCTTTCACCTTACATGTGTTCTATGTGTGGAACAAGTGGGGAGACTGTCTCTCATTTGTTCCTTCATGGTAGAGTTGCGCGGTCTCTTTGGGCTAGGCTCTTTGGCATGCGGGGAATATTTGGTATGCCCAACTACTGTTCATACTTCTTACAGATTCATTTCTGGGGATCTATAAGGGATAAGGAGTTGGGGCTCTTCTGGCATAATGCGCTTCTAGCTACCCTCTGGTGTATTTGGTTAGAGAGAAATGCCAAGGTGTTTTCCCAAGTCTCTTTGCCTACAGGTCTTCCGTGGGAGCACATTTGTTTCTTGGCTACCTTACGGAGTAAGACTGGGGGGCTTTGGGTAGTTATACTATCATTGATCTACAACGCAATTTGGCTAATTTTGTACTTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_343044.p1 GENE.S_Transcript_343044~~S_Transcript_343044.p1 ORF type:5prime_partial len:155 (-),score=3.82,zf-RVT|PF13966.2|6.5e-06,zf-RVT|PF13966.2|1.9e+03 S_Transcript_343044:151-615(-)
WTLTLGKINANDMRRCRRPTWCLSPYMCSMCGTSGETVSHLFLHGRVARSLWARLFGMRGIFGMPNYCSYFLQIHFWGSIRDKELGLFWHNALLATLWCIWLERNAKVFSQVSLPTGLPWEHICFLATLRSKTGGLWVVILSLIYNAIWLILYL*

Click here to download the sequence:
Link to NCBI Protein BLAST