Transcript Information: S_Transcript_343202.p2


Annotated TAIR IDAT5G09530.1
Annotated Gene Namehydroxyproline-rich glycoprotein family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:2960080-2961192 | Reverse length=370
E-Value5E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.64416903817561
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.16329816525348
Replicate 30.15559012850351
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_343202.p2 GENE.S_Transcript_343202~~S_Transcript_343202.p2 ORF type:5prime_partial len:137 (+),score=33.71,Cornifin|PF02389.11|0.0029,Cornifin|PF02389.11|8.3e-05 S_Transcript_343202:1-411(+)
CTTCCAAAACCCACCTTGCCTGAGCTCCCTAAGGCTGCAGTTCCTGAGATTCCGAAACCCACCTTGCCCGAGCTCCCTAAGCCTGCAGTTCCTGAAATTCCGAAACCGACCGTTCCTGAGCTCCCTAAACCCACTGAACACACATTAACCGACGCCCCCAAGCCAACTGTTCCTGAACTTTCCAAGCCCTCATTGCCCGAGTTGCCTAAGCCAACTGTCCCTGAATTACCAAAAGTTGCATTGCCCGAGCTGCCCAAGCCCGTCATGCCAGAGTTGCCTAAGCCCACAGTGCCTGAATTGCCAAAGCCTACACTGCCCGAGCTGCCCAAGACCACATTGCCAGAGTTGCCTAAGCCAACTTTGCCTGAAATGCCCAAACCTACACTACCAAATGTTCCAAGCAAACCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_343202.p2 GENE.S_Transcript_343202~~S_Transcript_343202.p2 ORF type:5prime_partial len:137 (+),score=33.71,Cornifin|PF02389.11|0.0029,Cornifin|PF02389.11|8.3e-05 S_Transcript_343202:1-411(+)
LPKPTLPELPKAAVPEIPKPTLPELPKPAVPEIPKPTVPELPKPTEHTLTDAPKPTVPELSKPSLPELPKPTVPELPKVALPELPKPVMPELPKPTVPELPKPTLPELPKTTLPELPKPTLPEMPKPTLPNVPSKP*

Click here to download the sequence:
Link to NCBI Protein BLAST