Transcript Information: S_Transcript_343246.p1


Annotated TAIR IDAT3G48010.1
Annotated Gene Namecyclic nucleotide-gated channel 16
Annotated Gene Symbol(s)ATCNGC16, CNGC16
Annotation TypeHomolog
Chromosome Positionchr3:17721335-17724028 | Reverse length=705
E-Value4E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.24565847294013
Replicate 20.20365651899244
Replicate 30.11349376051446
Condition 2: 8 Hour
Replicate 10.32808292795589
Replicate 20.48185520147103
Replicate 30.72145945739937
Condition 3: 24 Hour
Replicate 10.13443005224981
Replicate 20
Replicate 30.23281887143184


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_343246.p1 GENE.S_Transcript_343246~~S_Transcript_343246.p1 ORF type:complete len:325 (+),score=31.06,Ion_trans|PF00520.27|2.7e-08 S_Transcript_343246:104-1078(+)
ATGGTGCGTAGAGTTCCCTTGACAGCATCACCTCAGCCCACCTGCGAAAATCGTGAGAGTGATTCCTATGCTAGGAATTATAATCTGATCATATTTGCGATTGGCGTGTTTAGTTTTTGCCTTGATCCATGCTTCCTTTATCTTTCCAGAGACTGTGGCTCAAATTCCATGTGCATGGACCTCAAGCTGGGAGCAATTCTTGCCATTTTACGAACTTTGGGAGATTTCTCCTTTCTGAGCGGTAAGTTTTTTGTGGTCTACAGATCTCTTTTCCTTAATGCTCCTGAGAGATTGGAAGCTGTTAAGGAATCAAAGGATAATGTCCGAAACTACCTAAGATCTACATTTATAATTGATCTGGCAGCAACAATACCAGTGCCACAGATTCTTCTATGGAAAAAGATTATTCACGCCGCAGAGACATCCATGATCCCCCACAAGGTCGAGTCTCTCTACCTAGTCTTGGGACCGCAATATTCTTTCCGGGCAATGGCAATGTTTGATGTAAGCAAATATACATTCAAGCATATTACTATCATGATGAAGGCGAATGCTTGGACAGGGGCTTTGCTCAACCTCATATATTTCATGATTGTTAGCCATATATGGGGGGCCTTGTACTATGAAATGTACATAAACAAGTTACTACAGTGCAAGCATTTAGTTTCCAAAAAGGAAGCTAATGCCACAACACTTGACTGGGATCAACTGCTTGCAGCATGCGCACAGAATGAGGAGTTCAAGATTGGAATGTTTTCAGAGGCTTTCACCACAAATATTGTCAAGAGGAGTTTCGCTCAAAAATATGTGTATTGTTTGTCATGGGGGCTCAAAAGTTTAAGCTCCTTCGGCCAGATATTCAGTGCAAGTTCAGACCCTTTGGATACTATTTTCAGTTTTCTCACAGTTGTTTTTGGTTTGATTTTGTTTGGAGACTTGTTAGCCCGGATGCAGGTATCCATTAATTTAACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_343246.p1 GENE.S_Transcript_343246~~S_Transcript_343246.p1 ORF type:complete len:325 (+),score=31.06,Ion_trans|PF00520.27|2.7e-08 S_Transcript_343246:104-1078(+)
MVRRVPLTASPQPTCENRESDSYARNYNLIIFAIGVFSFCLDPCFLYLSRDCGSNSMCMDLKLGAILAILRTLGDFSFLSGKFFVVYRSLFLNAPERLEAVKESKDNVRNYLRSTFIIDLAATIPVPQILLWKKIIHAAETSMIPHKVESLYLVLGPQYSFRAMAMFDVSKYTFKHITIMMKANAWTGALLNLIYFMIVSHIWGALYYEMYINKLLQCKHLVSKKEANATTLDWDQLLAACAQNEEFKIGMFSEAFTTNIVKRSFAQKYVYCLSWGLKSLSSFGQIFSASSDPLDTIFSFLTVVFGLILFGDLLARMQVSINLT*

Click here to download the sequence:
Link to NCBI Protein BLAST