Transcript Information: S_Transcript_343437.p1


Annotated TAIR IDAT2G45190.1
Annotated Gene NamePlant-specific transcription factor YABBY family protein
Annotated Gene Symbol(s)AFO, FIL, YAB1
Annotation TypeHomolog
Chromosome Positionchr2:18628450-18630552 | Reverse length=229
E-Value4E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.819581566515
Replicate 26.6188368672544
Replicate 33.2274788146301
Condition 2: 8 Hour
Replicate 12.3991064106775
Replicate 22.2371848639727
Replicate 33.0641530932161
Condition 3: 24 Hour
Replicate 10.95571365271349
Replicate 22.6913276246913
Replicate 32.8374799955756


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_343437.p1 GENE.S_Transcript_343437~~S_Transcript_343437.p1 ORF type:3prime_partial len:160 (-),score=29.76,YABBY|PF04690.9|9e-34 S_Transcript_343437:1-477(-)
ATGTCATCTTCGTGGTCATCAAGTGGAGGAACAGCAACAGCTGCTGGGTTTGAGACTCCGGACCACCTCTCCCCTTCCGAGCAGCTCTGTTACGTCGGTTGCAACTTTTGTGACATTGTCCTTGTTGTGATTGTGCCGAGCAGCAGCTTGTTCAAGACGGTGACGGTGAAATGTGGTCACTGTAATAACCTGTTGTCCGTCAACTGGAAGACTGCAGTAATAATGCCGTTGGCTCCACAACCTTGCTCCAACCAGTTCCAGCTTCTTGGACCTTCCTCTTTCTTCTCCTCCCCTCATAACCTTCTGGAGGAGATTCGGAACTCGGCGCCAGATTTGCTGATCAACAATCATCAGCCAATGTTGAATGAGCCCATGATGCCAATTCGAGTTGATCATCATCATCATGACATCCCTAAACCTCCACCCGTCAATCGACCTCCAGAGAAGAGACAGAGAGTTCCATCTGCATATAACCGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_343437.p1 GENE.S_Transcript_343437~~S_Transcript_343437.p1 ORF type:3prime_partial len:160 (-),score=29.76,YABBY|PF04690.9|9e-34 S_Transcript_343437:1-477(-)
MSSSWSSSGGTATAAGFETPDHLSPSEQLCYVGCNFCDIVLVVIVPSSSLFKTVTVKCGHCNNLLSVNWKTAVIMPLAPQPCSNQFQLLGPSSFFSSPHNLLEEIRNSAPDLLINNHQPMLNEPMMPIRVDHHHHDIPKPPPVNRPPEKRQRVPSAYNR

Click here to download the sequence:
Link to NCBI Protein BLAST