Transcript Information: S_Transcript_343878.p1


Annotated TAIR IDAT4G25500.1
Annotated Gene Namearginine/serine-rich splicing factor 35
Annotated Gene Symbol(s)ATRSP35, ATRSP40, AT-SRP40, RSP35, RS40, At-RS40
Annotation TypeOrtholog
Chromosome Positionchr4:13025168-13027243 | Forward length=350
E-Value1.6E-111
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 130.371325837095
Replicate 229.725819518331
Replicate 325.552340451706
Condition 2: 8 Hour
Replicate 136.139211071783
Replicate 236.802544899703
Replicate 334.658591907336
Condition 3: 24 Hour
Replicate 125.513489878328
Replicate 228.459519116864
Replicate 326.088450510635


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_343878.p1 GENE.S_Transcript_343878~~S_Transcript_343878.p1 ORF type:complete len:262 (-),score=45.52,RRM_1|PF00076.18|3.3e-14,RRM_1|PF00076.18|2.7e-14,RRM_6|PF14259.2|3.8e-11,RRM_6|PF14259.2|3.7e-10,RRM_5|PF13893.2|1.6e-06,RRM_5|PF13893.2|9.9e-10,Nup35_RRM_2|PF14605.2|2.3e+02,Nup35_RRM_2|PF14605.2|5.9e-06 S_Transcript_343878:113-898(-)
ATGAGGGCCATCTTTTGTGGCAACTTGGAATTTGATGCGCGCCATTCTGAGGTTGAGCGTCTTTTCAAAAGATATGGCAGGGTTGAAAGGGTCGATATGAAGTCTGGATTTGCATTTGTCTATATGGAAGATGAAAGAGATGCCGATGATGCTATCAGAAAACTGGACCGGTACGAGTTTGGCAGGAGGGGACGCCGACTTCGTGTTGAGTGGACTAAGCAAGAAAGAGACAACCGAAGATCAGGTGGTGGACGAAAGCCTGCAGCTAATGACAGGCCCTCTAAAACCTTGTTTGTCATTAATTTTGACCCAATTTACACAAAATCCAAGGACTTGGAAAGACACTTTGATCCATATGGGAAGATAGTTAACATACGGATCCGGAGAAACTTTGCATTCATTCAGTTTGAAACCCAGGAGGATGCAACCCGGGCATTGGAAGCGACGAATATGAGCAAGATTATGGATAGGGTTATAACTGTGGAATATGCGATTCGAGATGATGACAGAAAGGATGGCTACAGTCCTGAAAGAAGGGGTAGGGACTTGTCTCCTGAGAGAGGTGGTTATGACTGTAGGAGGTCCCCAAGTCCTTATCGCAGGGATAGGGGCAGTCCAGACTATGGATATCGAAGAGCGAGGGGCAGCCCTGACTATGGCCGCGGGTCAAACCTGAGATCCAACCCTGATGCTAGGAGCAGTCCTACTTATAGTAGGGATGAAAGCCCTGCTAATGGAAGATACCACAGCCGCTCTCCCCCAGCACGAGATAGGTCAAGATCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_343878.p1 GENE.S_Transcript_343878~~S_Transcript_343878.p1 ORF type:complete len:262 (-),score=45.52,RRM_1|PF00076.18|3.3e-14,RRM_1|PF00076.18|2.7e-14,RRM_6|PF14259.2|3.8e-11,RRM_6|PF14259.2|3.7e-10,RRM_5|PF13893.2|1.6e-06,RRM_5|PF13893.2|9.9e-10,Nup35_RRM_2|PF14605.2|2.3e+02,Nup35_RRM_2|PF14605.2|5.9e-06 S_Transcript_343878:113-898(-)
MRAIFCGNLEFDARHSEVERLFKRYGRVERVDMKSGFAFVYMEDERDADDAIRKLDRYEFGRRGRRLRVEWTKQERDNRRSGGGRKPAANDRPSKTLFVINFDPIYTKSKDLERHFDPYGKIVNIRIRRNFAFIQFETQEDATRALEATNMSKIMDRVITVEYAIRDDDRKDGYSPERRGRDLSPERGGYDCRRSPSPYRRDRGSPDYGYRRARGSPDYGRGSNLRSNPDARSSPTYSRDESPANGRYHSRSPPARDRSRS*

Click here to download the sequence:
Link to NCBI Protein BLAST