Transcript Information: S_Transcript_344324.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value2E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.17059616176398
Replicate 20
Replicate 30.11822266720257
Condition 2: 8 Hour
Replicate 10
Replicate 20.57363714460838
Replicate 30.54656019499952
Condition 3: 24 Hour
Replicate 10.42009391328066
Replicate 20.43584253031437
Replicate 30.16167977182767


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_344324.p1 GENE.S_Transcript_344324~~S_Transcript_344324.p1 ORF type:complete len:156 (+),score=35.54,RVT_1|PF00078.23|2.2e-10 S_Transcript_344324:51-518(+)
ATGGGGCTTCTAGCGAGTGGTTCTCCTCTTCAAGGGCGCCCACTTTCCCCATTTTTGTTTACCTTGGTTGTGGATGTTTTGAGTAGATTGTTGGAGAGGGCTGTGGATCGTGGGGTAGTTGAGGGTTTCAAGGTGGGTAGGGAAGGGGTTCATGTGTCTCACTTACAGTTTGTTGATGACACTATTTTGTTCCTTGATGCTGATTTGGAGAAGTTCCAGAATGTGCTCACAATCTTCCAGATTTTTGAGGTGGTTACCGGTATGCGAGTGAATATGAATAAATTTAGCTTGGCTCGGGTTAATATGTCAAAGGATGAGTTGATGGCATTTGCCGGAATTCCTTTGGGTGGTAATCCTCGGGCAACCTCTTTTTGGGAACCAGTGGTGAGGCGAGTTACATGGAGGTTGGAAATAGATTTACTATTGTTTTGGTGGGAGGATCTTCCTCTTGCATTCTTGCCTCTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_344324.p1 GENE.S_Transcript_344324~~S_Transcript_344324.p1 ORF type:complete len:156 (+),score=35.54,RVT_1|PF00078.23|2.2e-10 S_Transcript_344324:51-518(+)
MGLLASGSPLQGRPLSPFLFTLVVDVLSRLLERAVDRGVVEGFKVGREGVHVSHLQFVDDTILFLDADLEKFQNVLTIFQIFEVVTGMRVNMNKFSLARVNMSKDELMAFAGIPLGGNPRATSFWEPVVRRVTWRLEIDLLLFWWEDLPLAFLPL*

Click here to download the sequence:
Link to NCBI Protein BLAST