Transcript Information: S_Transcript_344624.p1


Annotated TAIR IDAT4G25000.1
Annotated Gene Namealpha-amylase-like
Annotated Gene Symbol(s)ATAMY1, AMY1
Annotation TypeOrtholog
Chromosome Positionchr4:12852109-12853825 | Reverse length=423
E-Value5.1E-197
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.69124678532936
Replicate 21.0315070442475
Replicate 30.047903210606755
Condition 2: 8 Hour
Replicate 10.27695312100173
Replicate 20.058108697765524
Replicate 30.77512173109023
Condition 3: 24 Hour
Replicate 10.17021987135528
Replicate 20.058867043055448
Replicate 30.19653541094896


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_344624.p1 GENE.S_Transcript_344624~~S_Transcript_344624.p1 ORF type:5prime_partial len:385 (+),score=80.89,Alpha-amyl_C2|PF07821.8|1.3e-16,Alpha-amylase|PF00128.20|5e-15 S_Transcript_344624:2-1156(+)
AACTATCTTATGAATTCCGTTGATGATCTAGCTCGGGCAGGAGTTACTCACATTTGGCTTCCCCCACCAACTCATTCAGTCTCTCCTCAAGGATATCTCCCCGGAAGATTGTATGATCTTGACGCCTCTAAATATGGAAATGAGGTTCAACTAAAGGCATTGATCAGTGCCTTGCATCAAAAAGGAATCAAAAGTGTTGCTGACATAGTGATAAACCATAGATGTGCAGACAAGAAAGATGGGAGAGGGATATACTGCATCTTTGAAGGAGGAACCTCGGATGATCGTTTGGATTGGGGCCCTTGGGCAATTTGTAGGGATGACACCCAATATTCTGATGGCTCTGGCAATCTTGATACAGGGGCAGGCTATGGTGCTGCCCCAGATATTGATCATCTTAACTTAAGGGTACAAAAGGAGTTATCAGATTGGATGAACTGGCTTAAATCTGACATTGGTTTCAATGGCTGGAGATTTGATTTTGTTAAGGGATATGCCCCCAGCATTACCAAGATTTATATGGAACAAACCAAGCCGGATTTCGCTGTCGGAGAGCTGTGGGATTCTATGATTTATGATCCAGATGGTAAGCCAGACTACAACCAAGACGCCAACAGAAATGAGCTTGTCAGGTGGGTGCAGGCAGCTGGTGGTGGAGTTGTTAGTGCATTTGATTTCACTACAAAAGCTATTTTGCAAGCTGCTGTTGAAGGGGAATGGTGGCGCATGAAAGATCCTAGTGGAAAGCCCAGTGGAATGATAGGAGTTATGCCTAAGAATGCTGTTACTTTTATTGATAACCATGATACAGGTTCTACTCAGAAATTATGGCCATTTCCATCAGATAAAGTTATGCTAGGATATGCTTATATCCTTACCCATCCAGGAATTCCTTCAATATTCTATGATCACTTTTTCGAGTGGGGATTGAAGGAGGAAATTGTGAAGTTAACTTCAGTAAGGGCAAGAAATGGAATAAGTGAAACAAGTAATGTCAATATAATGGTTTCAGATGCAGATTTATATCTTGCAATGGTTGATGGGAAGGTTCTTGTCAAACTTGGGCCAAGATATGATATTGGCAATCATGTCCCTGCAAATTTCAAGGTAGCTCTATTTGGTAAGGACTATTGCATATGGGAAAAGCAAGGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_344624.p1 GENE.S_Transcript_344624~~S_Transcript_344624.p1 ORF type:5prime_partial len:385 (+),score=80.89,Alpha-amyl_C2|PF07821.8|1.3e-16,Alpha-amylase|PF00128.20|5e-15 S_Transcript_344624:2-1156(+)
NYLMNSVDDLARAGVTHIWLPPPTHSVSPQGYLPGRLYDLDASKYGNEVQLKALISALHQKGIKSVADIVINHRCADKKDGRGIYCIFEGGTSDDRLDWGPWAICRDDTQYSDGSGNLDTGAGYGAAPDIDHLNLRVQKELSDWMNWLKSDIGFNGWRFDFVKGYAPSITKIYMEQTKPDFAVGELWDSMIYDPDGKPDYNQDANRNELVRWVQAAGGGVVSAFDFTTKAILQAAVEGEWWRMKDPSGKPSGMIGVMPKNAVTFIDNHDTGSTQKLWPFPSDKVMLGYAYILTHPGIPSIFYDHFFEWGLKEEIVKLTSVRARNGISETSNVNIMVSDADLYLAMVDGKVLVKLGPRYDIGNHVPANFKVALFGKDYCIWEKQG*

Click here to download the sequence:
Link to NCBI Protein BLAST