Transcript Information: S_Transcript_344979.p1


Annotated TAIR IDAT5G21160.3
Annotated Gene NameLA RNA-binding protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:7198817-7203879 | Reverse length=833
E-Value4E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.41398001921392
Replicate 20.34319894867245
Replicate 30.32787086370845
Condition 2: 8 Hour
Replicate 10.56867707512355
Replicate 21.4914565759818
Replicate 30.94737100466584
Condition 3: 24 Hour
Replicate 10.19417674213861
Replicate 20.40291220580173
Replicate 30.28024493783462


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_344979.p1 GENE.S_Transcript_344979~~S_Transcript_344979.p1 ORF type:complete len:450 (+),score=66.59,La|PF05383.13|6.5e-23 S_Transcript_344979:352-1701(+)
ATGATGGCGACGACGGAGATGTCTTCCAATAGCCACTCGCCACGTAGCCCTAACCCGCCACGTCGGACTACGGCGGGACTATCGTCCCCTTGGGCTCAAGTAGTAGTTCGTGGTGTTAGTGAACCACCTGTCGTCGTCGATTCCGTCTCTCCCGTTCATGAACCGGCGTCCTCGAGTTTATCAACCGGAGATGGTTCAGATAAAACGACCGGCGGCAATGTAGGAACCAAGCCGGCTTGGAATAAACCTTCAAATGTAGTTTCTCTTTCTGTTACTGTTGGCGGTGGTGGTGAGGAATCTGTTTCTGATCAGAGTTGCGATTCGGCTTCTGGTAGCGGGGCGGCTGGTACTCCTGCTGTTATGGGCGCCTCTGCTTGGCCTGCTCTCGCCGAGTCAACTCGTCACTCGTTGAAATCTTCGTCGATTGATTCTTCTCCTCCGAAATCTGCTTCTGAGGGGAATGTCCCTGTTTCTCAGGGACCGTTAACTCTTGATTTACAAGAACAATCAAAACAAAGTAGTGGTAGTGCTAACGCAGTTAGGCATAGACCGGTGAAGCGTGGTGGTGGAGGAAACAGACAAGGTGGATTTTCTAGGGGCGCATCAACTCCTTCCATGCCTCCAGTATTTCCAGTTCCTGAAATAACACAAAGTGGGTTTAGCAATATGGTGCCTCTTATTGATTTAGCTTCAAGGGAAGCTTTTGCGTCTAACTCTCAATCTCCTGGTGACCATTCTCATCGTGGTTCAAACCATCGAGGAGGTTTTGGTCATGGGAGGAACAATTATCGCGGGAATAGACGCGATCAATATCATGGAAATCATGATTGGGTCTCTTCTCAAATCCCACCCATAAGGGATGCACATGGACATCCTCACATACCTCCTCCTAGGGGATTTATGAGCCCCCATGCACAAGGGGCTCCTCCATTTGCATTTTCTCCTGTTTTGAGACCTTTTGGGGATGCCATAGTTTATCCTGATGTACCGCATTTGATCTATTATCCTTTGCCACCTGATTCCTTCAGGGGAATGCCCTATTTCCCTGTTCCACCGCCTTCCTCGTATTTCGTTATGTCTCATTCAACCTTAGATATATCAATTGTCAAGCAAATTGATTACTACTTCAGTGACGCTAACCTGGTAAAAGACGAGTATTTGCGATCAAAAATGGACAAGGATGGTTGGGTTCCCATTAGTTTAATATCAAGCTTTCCAAAAGTTCAAAGTCTCACAGACAATATCCCATATATACTCAAGTGCTTGAGACAATACTCTTCTATTGTTGAAGTACAGGATGACAAAGTAAGAAGACGTGATGAGTGGACCAAATGGATAGTATACAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_344979.p1 GENE.S_Transcript_344979~~S_Transcript_344979.p1 ORF type:complete len:450 (+),score=66.59,La|PF05383.13|6.5e-23 S_Transcript_344979:352-1701(+)
MMATTEMSSNSHSPRSPNPPRRTTAGLSSPWAQVVVRGVSEPPVVVDSVSPVHEPASSSLSTGDGSDKTTGGNVGTKPAWNKPSNVVSLSVTVGGGGEESVSDQSCDSASGSGAAGTPAVMGASAWPALAESTRHSLKSSSIDSSPPKSASEGNVPVSQGPLTLDLQEQSKQSSGSANAVRHRPVKRGGGGNRQGGFSRGASTPSMPPVFPVPEITQSGFSNMVPLIDLASREAFASNSQSPGDHSHRGSNHRGGFGHGRNNYRGNRRDQYHGNHDWVSSQIPPIRDAHGHPHIPPPRGFMSPHAQGAPPFAFSPVLRPFGDAIVYPDVPHLIYYPLPPDSFRGMPYFPVPPPSSYFVMSHSTLDISIVKQIDYYFSDANLVKDEYLRSKMDKDGWVPISLISSFPKVQSLTDNIPYILKCLRQYSSIVEVQDDKVRRRDEWTKWIVYN*

Click here to download the sequence:
Link to NCBI Protein BLAST