Transcript Information: S_Transcript_345073.p1


Annotated TAIR IDAT4G02460.1
Annotated Gene NameDNA mismatch repair protein, putative
Annotated Gene Symbol(s)PMS1
Annotation TypeHomolog
Chromosome Positionchr4:1076306-1080510 | Reverse length=923
E-Value0.0008
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.57058938510814
Replicate 30
Condition 2: 8 Hour
Replicate 10.36767914339884
Replicate 20.38572152827115
Replicate 30.18375730693949
Condition 3: 24 Hour
Replicate 10.37663592225162
Replicate 20.19537768600299
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_345073.p1 GENE.S_Transcript_345073~~S_Transcript_345073.p1 ORF type:internal len:116 (+),score=29.68 S_Transcript_345073:3-347(+)
AAGTTTGGTCCTGTTCAGTCATCACTTGCCAAGTTTGTCACTGTGCAAAAGCGGAAGCTTGAAAGTATATCAAAACCCTTATCTGAAGTTCCTGTCTTGAGAAATGACTCTGCTCATTGTAATCCAGTAAACCGTGATTCTGATTTGCATGTTGCTGCTTCAAACTCAGCCGCTAAGTTCCAGTGTGCTTATGACTCTGCGGGATTTCCTGAGAACAAATCATCAATGCATTTGAAAACTGATGAAGTTTGTGGTCAAGCAAGTACTCCTGTACTAAATGATAATGATACTTGTGTGGAAGTGTCAGGACAGGTGATTGGACAATTTAATCTTGGCTTTATAATT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_345073.p1 GENE.S_Transcript_345073~~S_Transcript_345073.p1 ORF type:internal len:116 (+),score=29.68 S_Transcript_345073:3-347(+)
KFGPVQSSLAKFVTVQKRKLESISKPLSEVPVLRNDSAHCNPVNRDSDLHVAASNSAAKFQCAYDSAGFPENKSSMHLKTDEVCGQASTPVLNDNDTCVEVSGQVIGQFNLGFII

Click here to download the sequence:
Link to NCBI Protein BLAST