Transcript Information: S_Transcript_345239.p1


Annotated TAIR IDAT5G12020.1
Annotated Gene Name17.6 kDa class II heat shock protein
Annotated Gene Symbol(s)HSP17.6II
Annotation TypeOrtholog
Chromosome Positionchr5:3882409-3882876 | Reverse length=155
E-Value8E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.8444378749
Replicate 213.304194708049
Replicate 316.589194768666
Condition 2: 8 Hour
Replicate 13.1077201969691
Replicate 22.9229550986577
Replicate 33.4276739867307
Condition 3: 24 Hour
Replicate 111.087101671106
Replicate 215.944390053712
Replicate 313.941833590768


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_345239.p1 GENE.S_Transcript_345239~~S_Transcript_345239.p1 ORF type:5prime_partial len:199 (+),score=37.62,HSP20|PF00011.17|1.7e-29 S_Transcript_345239:1-597(+)
ATCGCACTTAAATTCTCTCAGAGGCATATCCACAAACACTTGGTAAGCATAATCAAAACACTCTCAAAACCCACCAAAATTCCGGTCCCAAAGAAGAGAAAGATGGATTTCAGAATGATGGGCTTCGATTCCCCAGTCTTCAACGCACTGAACAACCTCTCCCACATCCTCGACACCGACGACTACAACCCATCAGCCACCGACAACAAGGGAAGCTCCGCCCCATCAAACGCCTACGTGAGGGATGCGCGTGCGATGGCGCGTACAGCGGCGGACGTGAAGGAGTACCCGAACTCGTACCAGTTCATCATCGATATGCCGGGGCTGAAGAGCTCGGACATTAAGGTCCAGATCGAGGATGAAAATGTGTTGGTGATAAGTGGAGAGAGAAAGAGAGAGGAGGAGAAAGATGGGGTTAAGTATTTGAGGATGGAGAGGAGAGTTGGGAAGTTTATGAGGAAGTTTGTGTTGCCAGAGAATGCAAATGTGGAGGGAATTAGTGCTGTTTGTCAAGATGGGGTTTTGACTGTGACTGTTCAGAAGTTGCCACCCCCTGAGCCTAAGAAGCCCAAGACTATTGAGGTTAAGGTTGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_345239.p1 GENE.S_Transcript_345239~~S_Transcript_345239.p1 ORF type:5prime_partial len:199 (+),score=37.62,HSP20|PF00011.17|1.7e-29 S_Transcript_345239:1-597(+)
IALKFSQRHIHKHLVSIIKTLSKPTKIPVPKKRKMDFRMMGFDSPVFNALNNLSHILDTDDYNPSATDNKGSSAPSNAYVRDARAMARTAADVKEYPNSYQFIIDMPGLKSSDIKVQIEDENVLVISGERKREEEKDGVKYLRMERRVGKFMRKFVLPENANVEGISAVCQDGVLTVTVQKLPPPEPKKPKTIEVKVA*

Click here to download the sequence:
Link to NCBI Protein BLAST