Transcript Information: S_Transcript_345296.p1


Annotated TAIR IDAT4G20520.1
Annotated Gene NameRNA binding;RNA-directed DNA polymerases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11045912-11047716 | Forward length=376
E-Value7E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.31556918460688
Replicate 20.26161410542508
Replicate 30.14579238010751
Condition 2: 8 Hour
Replicate 10.16858016060975
Replicate 20.088426279208406
Replicate 30.58976653452518
Condition 3: 24 Hour
Replicate 10.77709071705671
Replicate 20.80622254619418
Replicate 30.39876750047614


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_345296.p1 GENE.S_Transcript_345296~~S_Transcript_345296.p1 ORF type:complete len:253 (+),score=31.87,RVT_1|PF00078.23|5.8e-34 S_Transcript_345296:225-983(+)
ATGGACCTATTGCATGCTACAATTCAATTTACAAATGCATTTCTAAACTGCTTTGTAAAAAGGCTAAATGAGGTGCTACCAAAAATTGTTGATGAAAATCAAGGAGCTTTTGTTAAAGGTCGAAGTATTTGTCACAATATCATGATAATACAAGACATTATCAGACTGTATAATAGGAAGAATGCTTCCCCCAGATGCTTGATGAAGGTGGATATGAGGAAGGCATATGATACAATTGATTGGACTTTTCTTGAGAATCTTATGAAGGGATTAGGCTTTCCTATTAAATTTGTCTATTGGATTATGAGGTGTGTGACTACAACTAGCTACCAGTTGAATATTATTGACATATTACATGAAGAATTCAAAGGAGGCAAAGGTATAAGGCAAGGTGACCCCATATCTCCCCTACTTTTTGTGATGGTGATGGAATATCTTACTAGGATATTAAAGAGGGCTAGCACTCAACCTGATTTTAGGTTTCATCCCTTATGTAAATCTTTTGGTCTAATTAGCCTGTGTTTTGCTGATGACCTTATGGTGTTTTGCAAGGCTGATCTGGTCTCTATTGGTCATATTATGAAGAGCTTTGAGGCATTTTCTTGTGCTACTGGGCTCCAAGAAAATTTGCAGAAGTCCCATATATATCTAGGAGGTATCTCAGATGAGCAGAAGAATCACATTGTGCAAGCCACTGGCTTCAATGAAGGGACTTTCCCTATGAGATATTTGGGCATGCCTTTCTCCCCCACCAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_345296.p1 GENE.S_Transcript_345296~~S_Transcript_345296.p1 ORF type:complete len:253 (+),score=31.87,RVT_1|PF00078.23|5.8e-34 S_Transcript_345296:225-983(+)
MDLLHATIQFTNAFLNCFVKRLNEVLPKIVDENQGAFVKGRSICHNIMIIQDIIRLYNRKNASPRCLMKVDMRKAYDTIDWTFLENLMKGLGFPIKFVYWIMRCVTTTSYQLNIIDILHEEFKGGKGIRQGDPISPLLFVMVMEYLTRILKRASTQPDFRFHPLCKSFGLISLCFADDLMVFCKADLVSIGHIMKSFEAFSCATGLQENLQKSHIYLGGISDEQKNHIVQATGFNEGTFPMRYLGMPFSPTK*

Click here to download the sequence:
Link to NCBI Protein BLAST