Transcript Information: S_Transcript_34592.p1


Annotated TAIR IDAT1G15420.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp12 (InterPro:IPR007148); Has 764 Blast hits to 656 proteins in 193 species: Archae - 0; Bacteria - 42; Metazoa - 237; Fungi - 154; Plants - 85; Viruses - 23; Other Eukaryotes - 223 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:5301794-5303296 | Reverse length=278
E-Value3.4E-76
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.093940999058
Replicate 213.583433869365
Replicate 314.726662395114
Condition 2: 8 Hour
Replicate 118.619930351527
Replicate 214.942391442205
Replicate 314.157540573458
Condition 3: 24 Hour
Replicate 18.9661835222588
Replicate 28.2029467272601
Replicate 39.4112105989239


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_34592.p1 GENE.S_Transcript_34592~~S_Transcript_34592.p1 ORF type:complete len:268 (+),score=70.35,Utp12|PF04003.8|1.4e-12 S_Transcript_34592:245-1048(+)
ATGGGTCGTCATGATGTAGCCTTACAAACATCAGCTGAGAAGGGTTCCAAGAAAAAATCAAGGAAAAAGAGAACAGCACCTGAACCTGTTGCTCTACCTACAAAGAACCTTGCTCAAGATAATGGAGAAGATGCAAATGGGATTCAGATTGATGACAATGAGCCTACTATGGCTGACAAACTTGCAAGTTTAGATCTCGTAAATAAAGATAATGGTGAAGCCATGGAAAGGCAAGATCCTTCTCTTACGCAGCCTCCTAGTGCAGACTCTGTTCATGTTTTGCTAAAACAAGCATTGCATGCGGATGACCACGCTCTTCTCTTAGAGTGCTTGTACAATCAGGATGACAAGGTTATCACAAAATCAGTCTCATTGTTAAATCCAGTTGACATTTTCAAGCTTTTGGGAGCACTTTTATCTATTATTCAGTCAAGGGGTGCAGTTTTGGTGTGTGCTCTACCATGGCTCCGGAGTTTACTGCTTCAGCATTCTAGCAGGATAATGTCCCAAGAGTCTTCTTTAGCCGCCCTTAATTCCTTATACCAGCTTATTGAATCTAGGGTGGCAACCTTTAATCCCACTCTACAATTGGCTAGTAGTTTGGATTTCTTGTTTGGGTCTGAGATTGACGACGATGATGGACATGGTGAGTACGAGTCAATAACTCCAGTTATCTATGAAGATAAAGATGATACCGAGGAAGAGGAATCTGAAGAAGATGTTATGGACACTGATGAAGAGAGTAAAGAACCAGAAGAGTTCAGTGGCATCAGCGATATTGATGAAAGCGAAGACTTAGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_34592.p1 GENE.S_Transcript_34592~~S_Transcript_34592.p1 ORF type:complete len:268 (+),score=70.35,Utp12|PF04003.8|1.4e-12 S_Transcript_34592:245-1048(+)
MGRHDVALQTSAEKGSKKKSRKKRTAPEPVALPTKNLAQDNGEDANGIQIDDNEPTMADKLASLDLVNKDNGEAMERQDPSLTQPPSADSVHVLLKQALHADDHALLLECLYNQDDKVITKSVSLLNPVDIFKLLGALLSIIQSRGAVLVCALPWLRSLLLQHSSRIMSQESSLAALNSLYQLIESRVATFNPTLQLASSLDFLFGSEIDDDDGHGEYESITPVIYEDKDDTEEEESEEDVMDTDEESKEPEEFSGISDIDESEDLE*

Click here to download the sequence:
Link to NCBI Protein BLAST