Transcript Information: S_Transcript_345952.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value1E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.16464768326504
Replicate 30.55052943533136
Condition 2: 8 Hour
Replicate 10
Replicate 20.33390818865264
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 21.0147975332693
Replicate 31.3175694838493


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_345952.p1 GENE.S_Transcript_345952~~S_Transcript_345952.p1 ORF type:5prime_partial len:134 (+),score=19.45,RVT_1|PF00078.23|5.5e-21 S_Transcript_345952:3-404(+)
AAAATAGATATTAGAAGAGCCTATGACACAATATCATGGAAGTTCTTGAAGCAAGCCTTACTATATTTTTGGTTTCCTGTGGAGATGGTTGATAGAATAATCGCCTGTGTGGATACAACACAATTTTCAGTGAATTTAGATGGGGGGCTGCAGGGATTCTTCAAGGAAGATTGTGGTTTAAGACTAGGGGACCCTATGTCACCTTACTTATTTGTGTTGTGTATGGAGGTGCTGTCTAGAATGTTGAGAAGGTGCTTTCTGCAGCAGAGATTCAAAGCTCGTCCTAAGTGTACAAAGAATAAGTTAAATCATGTGATATTTGCAAATGATATGCTATTGTTTTCTAGAGGGGAAAGGGGCTCAGTGGCTGTTTTGCTGAATATAAGTGATAAATTTTCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_345952.p1 GENE.S_Transcript_345952~~S_Transcript_345952.p1 ORF type:5prime_partial len:134 (+),score=19.45,RVT_1|PF00078.23|5.5e-21 S_Transcript_345952:3-404(+)
KIDIRRAYDTISWKFLKQALLYFWFPVEMVDRIIACVDTTQFSVNLDGGLQGFFKEDCGLRLGDPMSPYLFVLCMEVLSRMLRRCFLQQRFKARPKCTKNKLNHVIFANDMLLFSRGERGSVAVLLNISDKFS*

Click here to download the sequence:
Link to NCBI Protein BLAST