Transcript Information: S_Transcript_34630.p1


Annotated TAIR IDAT1G55890.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:20901364-20902560 | Forward length=398
E-Value1E-66
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.7709582046262
Replicate 26.1800530973431
Replicate 35.9925977190411
Condition 2: 8 Hour
Replicate 12.2699295015436
Replicate 23.0079796490389
Replicate 33.7019119089884
Condition 3: 24 Hour
Replicate 15.2623528856894
Replicate 26.4753747360993
Replicate 35.4400487932603


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_34630.p1 GENE.S_Transcript_34630~~S_Transcript_34630.p1 ORF type:complete len:357 (+),score=61.60,PPR_2|PF13041.2|4.3e-06,PPR_2|PF13041.2|0.51,PPR_2|PF13041.2|4.4e-14,PPR_2|PF13041.2|4e-08,PPR_2|PF13041.2|5.9e-11,PPR_2|PF13041.2|1.1e-13,PPR_1|PF12854.3|0.018,PPR_1|PF12854.3|8.6e+02,PPR_1|PF12854.3|7.9e-07,PPR_1|PF12854.3|0.00029,PPR_1|PF12854.3|1.8e+02,PPR_1|PF12854.3|1.2e-09,PPR_1|PF12854.3|5.9,PPR|PF01535.16|7.4e-06,PPR|PF01535.16|8.9,PPR|PF01535.16|2.6e-06,PPR|PF01535.16|0.0054,PPR|PF01535.16|8.7,PPR|PF01535.16|2e-06,PPR|PF01535.16|1.6e+04,PPR_3|PF13812.2|0.35,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|1.6e-05,PPR_3|PF13812.2|7.1,PPR_3|PF13812.2|1.3,PPR_3|PF13812.2|0.14 S_Transcript_34630:169-1239(+)
ATGGCCACCATAAGAGCTCGTCTAAATCGCTTACTGAAAGCCCAGAAACCAGCAACTGTTGCTCGTTTCTCAACTGTTTCTCAGCCACCAGCAAAAACCCAGATTCCAGTTTCTGTAAAACAGCTAGTGAATGAACCCGATCTCGGAGAGCTCGTAAAGAAGTTCAAGCAACGGGCAACTGAGTCACTCAGTTTTCGCCACCGTCACAACATCTATGACTTCACCATTGCCCGTCTAGCTATTGCAAAGCAATATAATCTCATTGAAGACATCCTCGAGTCTCACAAGGACTTTGAGGAGATAACCCATGAAGGGTTTGCCATTCGCCTCATTCGGTTGTATGGTAAAGCGGGCATGTTCGATCATGCACGCAAGATATTCGACGAAATGCCTGAACGAAACTGCACCCGAACGGTTAAGTCCTTGAATGCCCTTATAAAGGCTGGGGTGGAATGTAAGAGGTTTGATGAGGTTGGGAAGATTTTTAGGGAGATGTCTTTGGAGTTTTCGATCAATTTGGATTGCTCTTGGTATAATACTATGATCCATGCTCTTTGTGAGATGGGGTCATTGGATGATGCACTTTTGATGGTTGGGGAGATGAAGGCAAAGGGGCTGAGCCCGAATGTCATCACTTTCAATACACTTCTTGATGCGTTTTATAGGGAAAGGGGTTTTGAGGGAGGGGAGAGGATATGGAATATGATGGTTGAGGACAATGTTGTTTGTAATACTCGGAGTTATAACTTGAAGATCCAGGCTACGGTTAATCTAGGAGAGCTTGATAGTGCGGTTGATTTGTTTGGAACATTGGAGAAAGAAGGGTTGAAGCCTGATGTCAATACTTTCAATGCCTTGATCAAGGGATTCTGTGATCAAGGAAATGTGGAAGAAGCAAAAGGGTGGTTCAATTCATTGGTAGAAAGTGGTGGTACCCCAAATAGAATTACATTTTCGATTCTCATCACCATGGTGATTATGAGTTGGCGTTTGATTTGGGCAAGAAGATGTTCAACCGGCAACTTGTGGTTGACGAGGCTCTGTTGCAGCTCGTTGTCAAACTGCTGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_34630.p1 GENE.S_Transcript_34630~~S_Transcript_34630.p1 ORF type:complete len:357 (+),score=61.60,PPR_2|PF13041.2|4.3e-06,PPR_2|PF13041.2|0.51,PPR_2|PF13041.2|4.4e-14,PPR_2|PF13041.2|4e-08,PPR_2|PF13041.2|5.9e-11,PPR_2|PF13041.2|1.1e-13,PPR_1|PF12854.3|0.018,PPR_1|PF12854.3|8.6e+02,PPR_1|PF12854.3|7.9e-07,PPR_1|PF12854.3|0.00029,PPR_1|PF12854.3|1.8e+02,PPR_1|PF12854.3|1.2e-09,PPR_1|PF12854.3|5.9,PPR|PF01535.16|7.4e-06,PPR|PF01535.16|8.9,PPR|PF01535.16|2.6e-06,PPR|PF01535.16|0.0054,PPR|PF01535.16|8.7,PPR|PF01535.16|2e-06,PPR|PF01535.16|1.6e+04,PPR_3|PF13812.2|0.35,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|1.6e-05,PPR_3|PF13812.2|7.1,PPR_3|PF13812.2|1.3,PPR_3|PF13812.2|0.14 S_Transcript_34630:169-1239(+)
MATIRARLNRLLKAQKPATVARFSTVSQPPAKTQIPVSVKQLVNEPDLGELVKKFKQRATESLSFRHRHNIYDFTIARLAIAKQYNLIEDILESHKDFEEITHEGFAIRLIRLYGKAGMFDHARKIFDEMPERNCTRTVKSLNALIKAGVECKRFDEVGKIFREMSLEFSINLDCSWYNTMIHALCEMGSLDDALLMVGEMKAKGLSPNVITFNTLLDAFYRERGFEGGERIWNMMVEDNVVCNTRSYNLKIQATVNLGELDSAVDLFGTLEKEGLKPDVNTFNALIKGFCDQGNVEEAKGWFNSLVESGGTPNRITFSILITMVIMSWRLIWARRCSTGNLWLTRLCCSSLSNCW*

Click here to download the sequence:
Link to NCBI Protein BLAST