Transcript Information: S_Transcript_34631.p1


Annotated TAIR IDAT1G55890.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:20901364-20902560 | Forward length=398
E-Value1.4E-98
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.1230027377722
Replicate 24.7434997548657
Replicate 34.6567908611091
Condition 2: 8 Hour
Replicate 13.3054354991556
Replicate 23.5235661607569
Replicate 33.3572459977846
Condition 3: 24 Hour
Replicate 14.2597522806659
Replicate 24.9293790178556
Replicate 34.5399679929209


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_34631.p1 GENE.S_Transcript_34631~~S_Transcript_34631.p1 ORF type:complete len:400 (+),score=84.27,PPR_2|PF13041.2|5e-06,PPR_2|PF13041.2|0.59,PPR_2|PF13041.2|5.2e-14,PPR_2|PF13041.2|8.1e-08,PPR_2|PF13041.2|2.3e-10,PPR_2|PF13041.2|2.9e-14,PPR_2|PF13041.2|0.32,PPR_2|PF13041.2|7e+02,PPR|PF01535.16|8.5e-06,PPR|PF01535.16|10,PPR|PF01535.16|3e-06,PPR|PF01535.16|0.0062,PPR|PF01535.16|51,PPR|PF01535.16|2.4e-06,PPR|PF01535.16|0.05,PPR|PF01535.16|14,PPR_1|PF12854.3|0.021,PPR_1|PF12854.3|9.8e+02,PPR_1|PF12854.3|9.2e-07,PPR_1|PF12854.3|0.00034,PPR_1|PF12854.3|3.3e+02,PPR_1|PF12854.3|1.4e-09,PPR_1|PF12854.3|0.0084,PPR_1|PF12854.3|45,PPR_3|PF13812.2|0.4,PPR_3|PF13812.2|1.6,PPR_3|PF13812.2|1.9e-05,PPR_3|PF13812.2|8.2,PPR_3|PF13812.2|4.6,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|2.7e+02,PPR_3|PF13812.2|7.7e+02 S_Transcript_34631:169-1368(+)
ATGGCCACCATAAGAGCTCGTCTAAATCGCTTACTGAAAGCCCAGAAACCAGCAACTGTTGCTCGTTTCTCAACTGTTTCTCAGCCACCAGCAAAAACCCAGATTCCAGTTTCTGTAAAACAGCTAGTGAATGAACCCGATCTCGGAGAGCTCGTAAAGAAGTTCAAGCAACGGGCAACTGAGTCACTCAGTTTTCGCCACCGTCACAACATCTATGACTTCACCATTGCCCGTCTAGCTATTGCAAAGCAATATAATCTCATTGAAGACATCCTCGAGTCTCACAAGGACTTTGAGGAGATAACCCATGAAGGGTTTGCCATTCGCCTCATTCGGTTGTATGGTAAAGCGGGCATGTTCGATCATGCACGCAAGATATTCGACGAAATGCCTGAACGAAACTGCACCCGAACGGTTAAGTCCTTGAATGCCCTTATAAAGGCTGGGGTGGAATGTAAGAGGTTTGATGAGGTTGGGAAGATTTTTAGGGAGATGTCTTTGGAGTTTTCGATCAATTTGGATTGCTCTTGGTATAATACTATGATCCATGCTCTTTGTGAGATGGGGTCATTGGATGATGCACTTTTGATGGTTGGGGAGATGAAGGCAAAGGGGCTGAGCCCGAATGTCATCACTTTCAATACACTTCTTGATGCGTTTTATAGGGAAAGGGGTTTTGAGGGAGGGGAGAGGATATGGAATATGATGGTTGAGGACAATGTTGTTTGTAATACTCGGAGTTACAACTTGAAGCTCCAGGCTACGGTTGATCTAGGAGAGCTTGATAGTGCGGTTGATTTGTTTGGAACATTGGAGAAAGAAGGGTTGAAGCCTGATGTCAATACTTTCAATGCCTTGATCAAGGGATTCTGTGATCAAGGAAATGTGGAAGAAGCAAAAGGGTGGTTCAATTCATTGGTAGAAAGTGGTGGTACCCCAAATGGAATTACATTTTCGATTCTGATCCCAAGGTTGTGTGACCATGGTGATTATGAGTTGGCGTTTGATTTGGGCAAGAAGATGTTCAACCGGCAACTAGTGGTTGATGAGTCTCTGTTGCAGCTTGTTGTCAAAGTGCTGGCGAAGAATTCGATGGTTAAAGAAGCCGAAGAACTCGTAGAGCTTGGCAACTCGAATACTTATGTTCAATACAACTTAGCATTGCCTGCAGACAGTGAAATCAATAGGAAACCTGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_34631.p1 GENE.S_Transcript_34631~~S_Transcript_34631.p1 ORF type:complete len:400 (+),score=84.27,PPR_2|PF13041.2|5e-06,PPR_2|PF13041.2|0.59,PPR_2|PF13041.2|5.2e-14,PPR_2|PF13041.2|8.1e-08,PPR_2|PF13041.2|2.3e-10,PPR_2|PF13041.2|2.9e-14,PPR_2|PF13041.2|0.32,PPR_2|PF13041.2|7e+02,PPR|PF01535.16|8.5e-06,PPR|PF01535.16|10,PPR|PF01535.16|3e-06,PPR|PF01535.16|0.0062,PPR|PF01535.16|51,PPR|PF01535.16|2.4e-06,PPR|PF01535.16|0.05,PPR|PF01535.16|14,PPR_1|PF12854.3|0.021,PPR_1|PF12854.3|9.8e+02,PPR_1|PF12854.3|9.2e-07,PPR_1|PF12854.3|0.00034,PPR_1|PF12854.3|3.3e+02,PPR_1|PF12854.3|1.4e-09,PPR_1|PF12854.3|0.0084,PPR_1|PF12854.3|45,PPR_3|PF13812.2|0.4,PPR_3|PF13812.2|1.6,PPR_3|PF13812.2|1.9e-05,PPR_3|PF13812.2|8.2,PPR_3|PF13812.2|4.6,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|2.7e+02,PPR_3|PF13812.2|7.7e+02 S_Transcript_34631:169-1368(+)
MATIRARLNRLLKAQKPATVARFSTVSQPPAKTQIPVSVKQLVNEPDLGELVKKFKQRATESLSFRHRHNIYDFTIARLAIAKQYNLIEDILESHKDFEEITHEGFAIRLIRLYGKAGMFDHARKIFDEMPERNCTRTVKSLNALIKAGVECKRFDEVGKIFREMSLEFSINLDCSWYNTMIHALCEMGSLDDALLMVGEMKAKGLSPNVITFNTLLDAFYRERGFEGGERIWNMMVEDNVVCNTRSYNLKLQATVDLGELDSAVDLFGTLEKEGLKPDVNTFNALIKGFCDQGNVEEAKGWFNSLVESGGTPNGITFSILIPRLCDHGDYELAFDLGKKMFNRQLVVDESLLQLVVKVLAKNSMVKEAEELVELGNSNTYVQYNLALPADSEINRKPE*

Click here to download the sequence:
Link to NCBI Protein BLAST