Transcript Information: S_Transcript_346410.p1


Annotated TAIR IDAT1G74040.1
Annotated Gene Name2-isopropylmalate synthase 1
Annotated Gene Symbol(s)IMS1, MAML-3, IPMS2
Annotation TypeOrtholog
Chromosome Positionchr1:27842258-27845566 | Forward length=631
E-Value6.4E-54
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.24641667810352
Replicate 20
Replicate 30.68306429939261
Condition 2: 8 Hour
Replicate 10.98728658875616
Replicate 20.41429349332827
Replicate 30.19736895930538
Condition 3: 24 Hour
Replicate 10.60680231918317
Replicate 20
Replicate 30.46707489639104


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_346410.p1 GENE.S_Transcript_346410~~S_Transcript_346410.p1 ORF type:internal len:108 (+),score=21.77,HMGL-like|PF00682.15|2.5e-32 S_Transcript_346410:1-321(+)
GTTGAGTATAGCCCTGAGGATGCTGGCAGATCAGATTGGGAGCTTCTATATCATATACTAGGAGAAGTTATCAAGGCAGGGGCAAACACTCTAAATATTCCCGATACTGTAGGTTATATAGTCCCGAAAGAGTCTAGAAAATTCATTGCTGATATAAAGGCCAACACTCCTGGAATTGAGAATGCGATAATCTCAACACACTATCAGAATGACCTTGGGCTCTCTATTGCAAACATGGTTGTTGGGGCATGTGCTGGTGCAAGGCAATTAGAAGTAACAATTAATGGAATTGGTGAAAGAGCTGGAAATGCTTCACTGGAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_346410.p1 GENE.S_Transcript_346410~~S_Transcript_346410.p1 ORF type:internal len:108 (+),score=21.77,HMGL-like|PF00682.15|2.5e-32 S_Transcript_346410:1-321(+)
VEYSPEDAGRSDWELLYHILGEVIKAGANTLNIPDTVGYIVPKESRKFIADIKANTPGIENAIISTHYQNDLGLSIANMVVGACAGARQLEVTINGIGERAGNASLE

Click here to download the sequence:
Link to NCBI Protein BLAST