Transcript Information: S_Transcript_346478.p1


Annotated TAIR IDAT2G15900.1
Annotated Gene NamePhox-associated domain;Phox-like;Sorting nexin, C-terminal
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:6927390-6932535 | Forward length=994
E-Value8E-83
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9451363029036
Replicate 22.4921423420449
Replicate 33.063577422525
Condition 2: 8 Hour
Replicate 13.8966660047917
Replicate 23.8649040839395
Replicate 32.2661366224565
Condition 3: 24 Hour
Replicate 12.9029745502451
Replicate 23.0118022028369
Replicate 32.5138250237657


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_346478.p1 GENE.S_Transcript_346478~~S_Transcript_346478.p1 ORF type:internal len:301 (-),score=67.72,PX|PF00787.20|4.4e-16 S_Transcript_346478:1-900(-)
TTGATTCGTAATGATGGGTCAGGTTCATTGATTCGTAATGATGGGTCAGGTTCATTGATTCGTAATGATGGGTCAGGTTCATTGATTCGTAATGATGGGTCACACTCAACCAAGCTTAAGAGTCGGGTTATAGGGGCTTACTTTGAGAAAATTGGATCCAAGTCTTTTGCTGTGTATTCAATTGCAGTGACTGATGCACAAAATAACACGTGGTTTGTTAAAAGAAGATACCGGAACTTTGAGAGATTGCATCGACATCTTAAGGATATTCCAAATTATAACCTTCATTTGCCCCCCAAAAGGATATTCTCATCCAGCACTGAAGATGCTTTTGTGCATCAGCGCTGTATCCAGCTTGATAAATATCTGCAAGATCTTTTATCAATAGCTAATGTTGCTGAACTGCATGAAGTCTGGGATTTTCTCAGTGCTTCATCGAAGAACTACTCGTTTGGAAAATCACCATCAGTGATGAAAACCCTTGCAGTCAATGTGGATGATGCTGTTGATGATATTGTACGCCAGTTCAAAGGGGTTTCAGATGGTTTAGTCCGAAAAGTTGTAGGTTCATCTTCATACCATGATGATACTCTCACAAGTGTGCCATCAAGGAACTTATCCTTGAATGAAAGTGATTTGAAGATGAATAGTTCAGTGGAGAGTTCTGTGGATACAGTTCATAACATTTCTGATAACGAGGAAACTTTTAGAGATGACAGTCATGACCATGATGCTTTAGATTCTGGTATGAAAGAAAATGGGTGGCATTCAGACACTGAATTGAACTCAAAGAGCTTTCCCCCTCGTATGGTTAAACAAATAGAAGATAGTGCACATTCATCTTCAGAAAAGATGAGGAGACAGGTCTTTTGGATCTCGAAGCAAATAATGCAATTAGTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_346478.p1 GENE.S_Transcript_346478~~S_Transcript_346478.p1 ORF type:internal len:301 (-),score=67.72,PX|PF00787.20|4.4e-16 S_Transcript_346478:1-900(-)
LIRNDGSGSLIRNDGSGSLIRNDGSGSLIRNDGSHSTKLKSRVIGAYFEKIGSKSFAVYSIAVTDAQNNTWFVKRRYRNFERLHRHLKDIPNYNLHLPPKRIFSSSTEDAFVHQRCIQLDKYLQDLLSIANVAELHEVWDFLSASSKNYSFGKSPSVMKTLAVNVDDAVDDIVRQFKGVSDGLVRKVVGSSSYHDDTLTSVPSRNLSLNESDLKMNSSVESSVDTVHNISDNEETFRDDSHDHDALDSGMKENGWHSDTELNSKSFPPRMVKQIEDSAHSSSEKMRRQVFWISKQIMQLV

Click here to download the sequence:
Link to NCBI Protein BLAST