Transcript Information: S_Transcript_346940.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value2E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.23691099022416
Replicate 20.065468218271557
Replicate 30.21890487933057
Condition 2: 8 Hour
Replicate 10.88592125946547
Replicate 20.59746776782653
Replicate 30.69576950639405
Condition 3: 24 Hour
Replicate 10.12964322546347
Replicate 20.26900666559463
Replicate 30.22452858520875


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_346940.p1 GENE.S_Transcript_346940~~S_Transcript_346940.p1 ORF type:complete len:337 (+),score=56.71,zf-RVT|PF13966.2|2.3e-13,zf-RVT|PF13966.2|9.8e+03,RVT_3|PF13456.2|1.3e-08 S_Transcript_346940:1251-2261(+)
ATGTTGACAAGCAATGAAGAAGGCACAAGGCATAGGTGGGGAGGCAATCAATGGAAGAGGTTATGGAAAATTCCTATGGCACAGAGAACTTTGGTTTTTGCTTGGAGAGTTCTAAATAGGTGTTTACCTATAAAAGCAGAAATAAAGAGAAGAATCCCTACATACCAGGACTTATGTCCTTTTTGCCTGAATCTGCAAGAGACCTATATCCATATCTTCTTTAAATGCCATTTCAGCAGAAGCTTATGGTTCCGAGTTAATGGTTTGAGGGTGGAGGCGAATCCTGACTGGGAGGAGGACAATTGGATAGATGCATGCTTTATTCCAGCCGCCCTGGGTATTACTGATAGAGCTGAACAACAGAACTTCACTATAAGGGCTATACTTATTATGGATGAAATTCGGAGACAAAGGAATGATCTTATTCATCAGAATATTCCACCTGATCTAGAAGGAGGAGCGAGAAGAATATCTTACAGATGGGAGGAGTGTAAAGGTTTGGAAAATCTGAATGCACCTACTCAGAGCCATGGCAGTACAGAAGAGTTTACTTTCAAGGAGGGAGGTTTTTTCTGCACTGATGCAGCTGTTCGGGAGAAGGGATCATATGGGGCTTGGATTCAATTTGCTAATCCCAAGGAGGTAACAAAAGAATATACAGACTTTATCTGCAGTACTTCCCCTATTGAAGCAGAAGTTTTTGCAATCAAGAAATTGGTGGAGAAAGGAGATCCTAACTGTTTGAGGAAGGCTACTATATACACCGATGCACAGGAAGTGGTTAATCAACTGAAGAAAGGGGGACCTTACTACTGGAGGATCAGACACCAACTGCAGGAGATCAAAAAGGCTTGTGATTTCTATGAATGTAATATTTGCTTTATTCCTAGGAAGTTTAACTTTATTGCACATAATGTAGCTACTCTGGCAGCAAACAAGAACCATGTTAGCTGGGTGAGCTCAAGGGAACTCCACACTGGAGAATTCTCTGAGGCTCTGTCATTTCGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_346940.p1 GENE.S_Transcript_346940~~S_Transcript_346940.p1 ORF type:complete len:337 (+),score=56.71,zf-RVT|PF13966.2|2.3e-13,zf-RVT|PF13966.2|9.8e+03,RVT_3|PF13456.2|1.3e-08 S_Transcript_346940:1251-2261(+)
MLTSNEEGTRHRWGGNQWKRLWKIPMAQRTLVFAWRVLNRCLPIKAEIKRRIPTYQDLCPFCLNLQETYIHIFFKCHFSRSLWFRVNGLRVEANPDWEEDNWIDACFIPAALGITDRAEQQNFTIRAILIMDEIRRQRNDLIHQNIPPDLEGGARRISYRWEECKGLENLNAPTQSHGSTEEFTFKEGGFFCTDAAVREKGSYGAWIQFANPKEVTKEYTDFICSTSPIEAEVFAIKKLVEKGDPNCLRKATIYTDAQEVVNQLKKGGPYYWRIRHQLQEIKKACDFYECNICFIPRKFNFIAHNVATLAANKNHVSWVSSRELHTGEFSEALSFR*

Click here to download the sequence:
Link to NCBI Protein BLAST