Transcript Information: S_Transcript_346941.p2


Annotated TAIR IDAT4G20520.1
Annotated Gene NameRNA binding;RNA-directed DNA polymerases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11045912-11047716 | Forward length=376
E-Value7E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.12679764113514
Replicate 30.10599273611265
Condition 2: 8 Hour
Replicate 10
Replicate 20.2571476855141
Replicate 30.122504871293
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.14495427819032


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_346941.p2 GENE.S_Transcript_346941~~S_Transcript_346941.p2 ORF type:3prime_partial len:174 (+),score=29.70,RVT_1|PF00078.23|6.4e-18 S_Transcript_346941:820-1338(+)
ATGATGGAGATTCCAGAAGAACAGGAAGTGATGGAGGTGATATCAGTAATGCATCCTCTTAAAGCTCCAGGGCCAGATGGGTTTCCAGCTCTGTTTTTTCAGAAATCATGGAGCACTATCAAGCTCAAAGTTGTCAATATGGTGCAAGCCTTTTTCAGGGATGGCCATATTCTTAAGGAATTAAATCATACCCATATAGCACTTATCCCGAAAAAGGAAAATGCCTTTACAGTTAAGGACTTTAGGTCAATTGCACTTTGTAATGTGGCCTATAAGGTGCTCTCAAAAATCTTGGCAAATAGGATAAAACCTTTGCTGAATAAGGTAATTAGTCCCTTGCAGGCTGCCTTTCTTCCAGGCAGACTTATTACTGATAATACAGTTATGATTCAAGAGATCCTCCACACAATGAAGAAATCTCGTTCCAGGGAGGGTCTAATGGCTATCAAGATGGACATTGCTAAAGCTTATGATAGGGTAAGCTGGCAAGCCTTGGAGGCAGTACTCAAAGGGGCTGGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_346941.p2 GENE.S_Transcript_346941~~S_Transcript_346941.p2 ORF type:3prime_partial len:174 (+),score=29.70,RVT_1|PF00078.23|6.4e-18 S_Transcript_346941:820-1338(+)
MMEIPEEQEVMEVISVMHPLKAPGPDGFPALFFQKSWSTIKLKVVNMVQAFFRDGHILKELNHTHIALIPKKENAFTVKDFRSIALCNVAYKVLSKILANRIKPLLNKVISPLQAAFLPGRLITDNTVMIQEILHTMKKSRSREGLMAIKMDIAKAYDRVSWQALEAVLKGAG

Click here to download the sequence:
Link to NCBI Protein BLAST