Transcript Information: S_Transcript_347078.p1


Annotated TAIR IDAT1G71270.1
Annotated Gene NameVps52 / Sac2 family
Annotated Gene Symbol(s)POK, TTD8, ATVPS52
Annotation TypeOrtholog
Chromosome Positionchr1:26863736-26869817 | Forward length=707
E-Value2.4E-70
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7169678216246
Replicate 21.708086933485
Replicate 32.6176786699304
Condition 2: 8 Hour
Replicate 11.1006653066907
Replicate 22.8866901470615
Replicate 31.7877807668694
Condition 3: 24 Hour
Replicate 11.2684125897764
Replicate 22.6319265056403
Replicate 30.97633720277869


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_347078.p1 GENE.S_Transcript_347078~~S_Transcript_347078.p1 ORF type:complete len:155 (-),score=24.58,Vps52|PF04129.8|6.5e-46 S_Transcript_347078:615-1079(-)
ATGAAATTCAGAAACAAAATCACTTCTGCGCTGTGTTCATGTGCTGTTTGGTTATTGATCTTATCTGAGCAGGTGAACATTTCATTGTGGCCTCGTTTTAAGATGGTCTTTGACATGCACATCAGTAGTCTGCGTAGTGCAAATGTTAAAACGTTGTGGGAAGATGATGTTCATCCTCATTATGTGATGAGACGTTATGCTGAGTTCACTGCTTCCCTCATTCATCTCAATGTTGCATATGGAGATGGCCAGTTAGAGTTGAACTTGGATCGACTTAGAATGGCAGCTGATGATTTAATAATGAAGCTATCCACACAGTTTCATAAATCTAAACTGCATACTGTGTTTCTTATAAACAACTATGACATGACAATTTCTGTCTTAAAGGAAGCTGGTCCAGAAGTTGGTAAGATTCAGTTGCATTTTGAGGAAGTGCTAAGAGCCAAACAACAATATTTGTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_347078.p1 GENE.S_Transcript_347078~~S_Transcript_347078.p1 ORF type:complete len:155 (-),score=24.58,Vps52|PF04129.8|6.5e-46 S_Transcript_347078:615-1079(-)
MKFRNKITSALCSCAVWLLILSEQVNISLWPRFKMVFDMHISSLRSANVKTLWEDDVHPHYVMRRYAEFTASLIHLNVAYGDGQLELNLDRLRMAADDLIMKLSTQFHKSKLHTVFLINNYDMTISVLKEAGPEVGKIQLHFEEVLRAKQQYLW*

Click here to download the sequence:
Link to NCBI Protein BLAST