Transcript Information: S_Transcript_347247.p2


Annotated TAIR IDAT3G05340.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:1524071-1526047 | Reverse length=658
E-Value2E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.28407025181349
Replicate 30
Condition 2: 8 Hour
Replicate 10.091525280331043
Replicate 20.67211562436947
Replicate 30.64039027139429
Condition 3: 24 Hour
Replicate 10.2812645942995
Replicate 20
Replicate 30.21649823523705


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_347247.p2 GENE.S_Transcript_347247~~S_Transcript_347247.p2 ORF type:complete len:233 (+),score=22.85,PPR_2|PF13041.2|8.6e-06,PPR_2|PF13041.2|1.1e-09,PPR_2|PF13041.2|7.8e+03,PPR_2|PF13041.2|3.5,PPR|PF01535.16|4.7e+02,PPR|PF01535.16|2.2e-06,PPR|PF01535.16|1e-05,PPR|PF01535.16|2.1e+03,PPR|PF01535.16|2.2e+03,PPR|PF01535.16|0.3,PPR_3|PF13812.2|1.4e+04,PPR_3|PF13812.2|0.001,PPR_3|PF13812.2|0.039,PPR_3|PF13812.2|1.2e+03,PPR_3|PF13812.2|1.1e+02,PPR_1|PF12854.3|0.0079,PPR_1|PF12854.3|0.2,PPR_1|PF12854.3|1.3e+03,PPR_1|PF12854.3|5.6e+03,PPR_1|PF12854.3|32 S_Transcript_347247:130-828(+)
ATGAAACCCAGATGGATTTCTCACAAACTAACCACTCTGTATATTTCCCTTCATCATTCGATCAGAACTCTCACTACTTTACCAACCCAAACAATTCCAAGTCATGTTCATGTAAGCCGTCTTCTATCCCATTGTGGAAGAGAAGGAAACCTCCATTTGGGCTCATCCCTTCACGCTTCAATAATAAAAAACTACCATTACTATGACCCGACAAATTACAATGATCCCAGAACTGCCATTGTCGTTTGGAACTCCCTGCTTTCGATGTACGCAAAATGCCGGGTTTTTCAAGATGCCCTTAAAGTGTTCGATGAAATGCCTAAGAGAGATACAGTGTCTTGGAATTCTGTTGTTTCTGGGGTTTTGAGTGATGGGGATTTCGATATGGGGTTCAAGTATTTTAGGGAGATGGTTGAGTTGGGTATTGACCAGCTTGATCAAGCCACTTTCACTACTGTTTTATCAGCTTGTGATGGTTCGGGTTTTTCGAGGGTCAGTAGCATGATACATGGGCTGGTAGTTTCTAGTGGTTATGCTAGTGAGGTTACTGTTGGAAATGCTTTGATTACGTCTTATTTTAAATGCGGGTGTTCTGATTCTGCAAAGCGGTTTTTGATGAAATGGCTGAGAGGAATGTTGTCACTTGGACTGCTGTTATCTCTGGTCTTGTTCAGAATGGGTTGTATGAGGATAGTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_347247.p2 GENE.S_Transcript_347247~~S_Transcript_347247.p2 ORF type:complete len:233 (+),score=22.85,PPR_2|PF13041.2|8.6e-06,PPR_2|PF13041.2|1.1e-09,PPR_2|PF13041.2|7.8e+03,PPR_2|PF13041.2|3.5,PPR|PF01535.16|4.7e+02,PPR|PF01535.16|2.2e-06,PPR|PF01535.16|1e-05,PPR|PF01535.16|2.1e+03,PPR|PF01535.16|2.2e+03,PPR|PF01535.16|0.3,PPR_3|PF13812.2|1.4e+04,PPR_3|PF13812.2|0.001,PPR_3|PF13812.2|0.039,PPR_3|PF13812.2|1.2e+03,PPR_3|PF13812.2|1.1e+02,PPR_1|PF12854.3|0.0079,PPR_1|PF12854.3|0.2,PPR_1|PF12854.3|1.3e+03,PPR_1|PF12854.3|5.6e+03,PPR_1|PF12854.3|32 S_Transcript_347247:130-828(+)
MKPRWISHKLTTLYISLHHSIRTLTTLPTQTIPSHVHVSRLLSHCGREGNLHLGSSLHASIIKNYHYYDPTNYNDPRTAIVVWNSLLSMYAKCRVFQDALKVFDEMPKRDTVSWNSVVSGVLSDGDFDMGFKYFREMVELGIDQLDQATFTTVLSACDGSGFSRVSSMIHGLVVSSGYASEVTVGNALITSYFKCGCSDSAKRFLMKWLRGMLSLGLLLSLVLFRMGCMRIV*

Click here to download the sequence:
Link to NCBI Protein BLAST