Transcript Information: S_Transcript_347400.p1


Annotated TAIR IDAT3G22470.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7966066-7967925 | Reverse length=619
E-Value1E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2808396316397
Replicate 20.47193132743347
Replicate 30.98624257131554
Condition 2: 8 Hour
Replicate 10.79827664288733
Replicate 20.23927110844627
Replicate 31.1398848986621
Condition 3: 24 Hour
Replicate 10.70090535263939
Replicate 21.2119685334945
Replicate 31.213895185273


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_347400.p1 GENE.S_Transcript_347400~~S_Transcript_347400.p1 ORF type:5prime_partial len:187 (+),score=30.06,PPR_2|PF13041.2|8.1e-10,PPR_2|PF13041.2|2.1e-14,PPR_2|PF13041.2|5.1e-16,PPR_2|PF13041.2|2.3e-06,PPR_2|PF13041.2|1.2e-06,PPR_1|PF12854.3|14,PPR_1|PF12854.3|8.3e-11,PPR_1|PF12854.3|4.7e-11,PPR_1|PF12854.3|8.5e-05,PPR_1|PF12854.3|0.00019,PPR|PF01535.16|4.9,PPR|PF01535.16|1.4e-05,PPR|PF01535.16|2e-07,PPR|PF01535.16|0.0012,PPR|PF01535.16|0.00039,PPR_3|PF13812.2|2,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|0.092,PPR_3|PF13812.2|1,PPR_3|PF13812.2|0.14,MRP-S27|PF10037.5|0.17,MRP-S27|PF10037.5|0.0053 S_Transcript_347400:1-561(+)
GCTTTCCAACTTTTCGAGGAAATGAAAACTCATGGACTACATCCAAATGCTGTCACATATGGTTCGTTGCTTGATGGTCTTTGTAAAAATGCACAAGTTGACGAGGCCATATCAATGCTAAAGCAATTGGACATAAATGGAGTGGTCCCTACCATTACCACCTTCAATATCTTAATTGATGGTTTATGTCAAGTAGGAAGACTTGAAGAAGCAGCAAGTTTCTTCTCTTCCCTCAAGGGAAGGGGTTTGCAACCAGATCAGTACACGTTCCATATAATGATCAGAGGACTTCGTAAGCAAAGGAAGCTAAATGATGCTAGTAAACTACTAAGGATAATGGAGGGTATGGGATGTCTACCTGACGGTTGCACGTACAACGTTATTATTAGAGGTTTTCTTTATGCTAAGAATATCAAAAAGGCTTTGGATCTTGTTAAGATTATGACAGGCAGAGGATTCATGGCTGATGCTAGCACCACATCGTTATTTTTTGACTTTATATCTTCTCATAAGGTTAGCAGTGCAGACAAGGCATTGCTTCAGAAGTTTTTTCAGAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_347400.p1 GENE.S_Transcript_347400~~S_Transcript_347400.p1 ORF type:5prime_partial len:187 (+),score=30.06,PPR_2|PF13041.2|8.1e-10,PPR_2|PF13041.2|2.1e-14,PPR_2|PF13041.2|5.1e-16,PPR_2|PF13041.2|2.3e-06,PPR_2|PF13041.2|1.2e-06,PPR_1|PF12854.3|14,PPR_1|PF12854.3|8.3e-11,PPR_1|PF12854.3|4.7e-11,PPR_1|PF12854.3|8.5e-05,PPR_1|PF12854.3|0.00019,PPR|PF01535.16|4.9,PPR|PF01535.16|1.4e-05,PPR|PF01535.16|2e-07,PPR|PF01535.16|0.0012,PPR|PF01535.16|0.00039,PPR_3|PF13812.2|2,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|0.092,PPR_3|PF13812.2|1,PPR_3|PF13812.2|0.14,MRP-S27|PF10037.5|0.17,MRP-S27|PF10037.5|0.0053 S_Transcript_347400:1-561(+)
AFQLFEEMKTHGLHPNAVTYGSLLDGLCKNAQVDEAISMLKQLDINGVVPTITTFNILIDGLCQVGRLEEAASFFSSLKGRGLQPDQYTFHIMIRGLRKQRKLNDASKLLRIMEGMGCLPDGCTYNVIIRGFLYAKNIKKALDLVKIMTGRGFMADASTTSLFFDFISSHKVSSADKALLQKFFQN*

Click here to download the sequence:
Link to NCBI Protein BLAST