Transcript Information: S_Transcript_347909.p1


Annotated TAIR IDAT3G63520.1
Annotated Gene Namecarotenoid cleavage dioxygenase 1
Annotated Gene Symbol(s)CCD1, ATCCD1, ATNCED1, NCED1
Annotation TypeOrtholog
Chromosome Positionchr3:23452940-23455896 | Forward length=538
E-Value8E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.25837865276874
Replicate 20.21420184036422
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.42417249496299
Replicate 20.66011101678682
Replicate 31.4692453051524


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_347909.p1 GENE.S_Transcript_347909~~S_Transcript_347909.p1 ORF type:3prime_partial len:103 (+),score=9.81 S_Transcript_347909:963-1268(+)
ATGGGCCCACGTTGGGGCCAAAGGTCCCTGAGATTTAATTTCTTCTGTTTATGCTTTGATGTATCTTTCTGTTGTACTTCATCTTTTAGTGCTTTGTTCATTAGATTGAAGTGTGTACTTTGTTGGAGGAACTTATATCACACTTTTGGACAACAGCTTGTCAAGATACTAAGCTCTTACTTTTTTGTTCACACAGATGTTCTTCGTGTATTGGAAGATGGAGATCTGCAAACCCTTGGAATGCTGGACTATGATAAGAGGTTGGCACACTCCTTCACAGCTCATCCAAAAGTTGACCCATTCACA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_347909.p1 GENE.S_Transcript_347909~~S_Transcript_347909.p1 ORF type:3prime_partial len:103 (+),score=9.81 S_Transcript_347909:963-1268(+)
MGPRWGQRSLRFNFFCLCFDVSFCCTSSFSALFIRLKCVLCWRNLYHTFGQQLVKILSSYFFVHTDVLRVLEDGDLQTLGMLDYDKRLAHSFTAHPKVDPFT

Click here to download the sequence:
Link to NCBI Protein BLAST