Transcript Information: S_Transcript_34807.p1


Annotated TAIR IDAT1G71490.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:26933326-26935371 | Reverse length=681
E-Value7.6E-269
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.2109039517653
Replicate 26.7954589274842
Replicate 37.407123311731
Condition 2: 8 Hour
Replicate 17.7546873880484
Replicate 28.2566388466834
Replicate 38.0115193847759
Condition 3: 24 Hour
Replicate 16.431939915141
Replicate 26.796068328864
Replicate 36.6391812952409


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_34807.p1 GENE.S_Transcript_34807~~S_Transcript_34807.p1 ORF type:complete len:737 (+),score=117.29,PPR_2|PF13041.2|3.2e+02,PPR_2|PF13041.2|6.4e-10,PPR_2|PF13041.2|0.93,PPR_2|PF13041.2|3e-10,PPR_2|PF13041.2|7.1e-06,PPR_2|PF13041.2|0.18,PPR_2|PF13041.2|4.1e-09,PPR_2|PF13041.2|0.11,PPR_2|PF13041.2|1.6e-11,PPR_2|PF13041.2|39,PPR|PF01535.16|2.8e+03,PPR|PF01535.16|1.1e+02,PPR|PF01535.16|2.6e-05,PPR|PF01535.16|0.3,PPR|PF01535.16|4.2e-10,PPR|PF01535.16|3.9e-05,PPR|PF01535.16|1.3e+04,PPR|PF01535.16|0.078,PPR|PF01535.16|1.4e-06,PPR|PF01535.16|0.0029,PPR|PF01535.16|1.4e-08,PPR|PF01535.16|0.041,PPR|PF01535.16|4.7e+03,PPR|PF01535.16|7.5e+03,PPR_1|PF12854.3|3.1e+03,PPR_1|PF12854.3|5.8,PPR_1|PF12854.3|92,PPR_1|PF12854.3|43,PPR_1|PF12854.3|2.5e-07,PPR_1|PF12854.3|0.00033,PPR_1|PF12854.3|20,PPR_1|PF12854.3|0.0014,PPR_1|PF12854.3|4.2e+03,PPR_1|PF12854.3|0.043,PPR_1|PF12854.3|5.3e-05,PPR_1|PF12854.3|1.7e+03,PPR_1|PF12854.3|0.013,PPR_3|PF13812.2|6.7e+03,PPR_3|PF13812.2|0.23,PPR_3|PF13812.2|1.4e+03,PPR_3|PF13812.2|3.1,PPR_3|PF13812.2|2.8e-05,PPR_3|PF13812.2|0.0029,PPR_3|PF13812.2|0.54,PPR_3|PF13812.2|0.06,PPR_3|PF13812.2|25,PPR_3|PF13812.2|1.6e-05,PPR_3|PF13812.2|7e+02,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|7.1e+03 S_Transcript_34807:208-2418(+)
ATGCCGTATCTTTCTTCGTGGTCTTATCCAAAAGGGTTGTTTATATCTCGGATTGAGAAGTGTGTTCCTAGGAAGTGGAAGCTAGATATCAAGCAAATAGGTATAACACATAATCAATTGGTCAGATTAGATACTTCTGGCACAACATCAAGAGCATCTGCAGTCAATGATGAATTGATGGTATATCCTTTGCTAACATCTCTGAAAGAATTCATCGCCCAAGGTGATCTCTACAAAGCATTTAGGGTCTTCTCTTCCATCCAACTTCATGTTTCTTCTTCTGTGTGCTATGATCTAATTGTAGACTCTTTTTCCTCTCTACTGATAGCTTGTTGTAATCACAAATCACTTTCACAGGGTAGGCAGTTCCATGCTCAGATCATAAATTTGGGTTTAGATCAACACTGTCTTTTGTTGCCGAAGCTTGTCACTTTATACTCTGCTTCTAATCTGCTTCCCCAGGCTCATTATATAGCTAAGAATTCTAGTTTTTTGCACCCTCTGGTTTGGAACATCCTTATATCAGCTTACATAAGAGATGGGCATTGCAAGGAGGCTTTGTTCACATACAACCAAATGTTGAGTATTGGGATTAGACCAGATCACTTCACATACCCATCTGTGCTTAAGGCATGTGGTGAACAAGCTGATCTTTCTTTTGGTAGAGAGATCCATAAATCCATTTCTCTTAGCAACTGTGGTGGTTCTCTATGTGTTCAAAATGCATTAATTTTAATGTATAGTAAATGTGGAGAACTCAAAGTTGCTCGTGAATTGTTTAACAACTTATCCAAGAGGGATAAATATTCATGGAATTCCATGATTTCTGGGTATGCTTCTAAGGGTATGTGGGAGGATGCATTTAAGCTGTTTGAACAAATGCAACTTGAGGGAGTTGAAATGAATATCATAACTTGGAACACAATTATTGGTGGCTGCTTGCAGACTGGAAATTATGAGAGTGCACTTCATTTGCTTTCTCAAATGAGGGCATGTGCCATCAACTTGGATGCTGTTTCAATGATCAGTGGTTTGGGTGCTTGCTCTCACCTGGGAGTTGTAAACCTGGGGAAAGAGATTCATGCTTATTCTGTCCGTGGTGGTTGTGATAAATTTCATAATGTTCAAAATGCATTAATAACTATGTATGCTAGGTGTCAGGACCATAAGCATGCATATATTGTGTTCCGGCAGATGGAAGATAAGGATATAATTTCCTGGAATTCAATAATTTCAGGTTATGCTCATTCTAATAAATCTGAGGAAGCATCTTTCTTGTTTAGGGAAATGTTGTTTTGTGGCTTTGAACCAAATTATGTGACCATTGCAAGTATCCTTCCTCTTTGTGCCCGAGTGGCTAATCTCCAACATGGTAAAGAACTCCACTGCTACATTATCAAGTATCACGAGTTCACTGACTATTTACTGTTGTCAAATGCTCTTGTCGATATGTATGCAAGAGCAGGCAAAATTTCCGAGGCCAAAAGAGTGTTTGACTCTTTAAGCAAGAAGGATGTTGTCACATATACCTCTCTAATAACAGGATATGGCATTCTAGGAGAGGGAGAAGTCGCATTAAAGTTATTCGAGGAGATGAAGAGGTCTGGAATCAAACCCGACCATATTACTATGGTTGCAGTTCTAGCGGCTTCTAGCCACTCCGGTCTTGTTAACCAAGGGCAATTGTTGTTTGAAAAATTGTGGAGTGTGTATGGCATAAGGCCTCGTGTCGAGCACTATGCATGCATGGTTGACCTTTTTGGTAGGGCAGGATTACTTAAGAAAGCTGAAGAGATGATAAGAATGATGCCTTATCAGCCAACTCCTGATATGTGGGCCACTCTGATAGGAGCTTGTCACATTCATCGGAACATGGATTTAGGAGAGTTGGCAGCAGAGAAATTGTTGGCAATGAGGCCCAAAAATTCACGATACTATGTGTTGATTGCTAATATGTATGCTGCTGCTGGCTGCTGGAATAAGCTGGCAACAGTCAGGACATTAATGAGGGACTTGGGAGTAATGAAGCCTCCAGGCTGTGCTTGGGTTGACATAGGATCTGGTTTTGAGCCCTTTATGGTAGCAGATGCATCCACTGAGTTGTCGAATGAGATTTACCCCTTACTGTATGGATTGAGTGCGCAAATGAAGGATGTTGGATATTTTGCCGATCATGTCATTATAGATTGTGATGAGGCTTGTCAGGAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_34807.p1 GENE.S_Transcript_34807~~S_Transcript_34807.p1 ORF type:complete len:737 (+),score=117.29,PPR_2|PF13041.2|3.2e+02,PPR_2|PF13041.2|6.4e-10,PPR_2|PF13041.2|0.93,PPR_2|PF13041.2|3e-10,PPR_2|PF13041.2|7.1e-06,PPR_2|PF13041.2|0.18,PPR_2|PF13041.2|4.1e-09,PPR_2|PF13041.2|0.11,PPR_2|PF13041.2|1.6e-11,PPR_2|PF13041.2|39,PPR|PF01535.16|2.8e+03,PPR|PF01535.16|1.1e+02,PPR|PF01535.16|2.6e-05,PPR|PF01535.16|0.3,PPR|PF01535.16|4.2e-10,PPR|PF01535.16|3.9e-05,PPR|PF01535.16|1.3e+04,PPR|PF01535.16|0.078,PPR|PF01535.16|1.4e-06,PPR|PF01535.16|0.0029,PPR|PF01535.16|1.4e-08,PPR|PF01535.16|0.041,PPR|PF01535.16|4.7e+03,PPR|PF01535.16|7.5e+03,PPR_1|PF12854.3|3.1e+03,PPR_1|PF12854.3|5.8,PPR_1|PF12854.3|92,PPR_1|PF12854.3|43,PPR_1|PF12854.3|2.5e-07,PPR_1|PF12854.3|0.00033,PPR_1|PF12854.3|20,PPR_1|PF12854.3|0.0014,PPR_1|PF12854.3|4.2e+03,PPR_1|PF12854.3|0.043,PPR_1|PF12854.3|5.3e-05,PPR_1|PF12854.3|1.7e+03,PPR_1|PF12854.3|0.013,PPR_3|PF13812.2|6.7e+03,PPR_3|PF13812.2|0.23,PPR_3|PF13812.2|1.4e+03,PPR_3|PF13812.2|3.1,PPR_3|PF13812.2|2.8e-05,PPR_3|PF13812.2|0.0029,PPR_3|PF13812.2|0.54,PPR_3|PF13812.2|0.06,PPR_3|PF13812.2|25,PPR_3|PF13812.2|1.6e-05,PPR_3|PF13812.2|7e+02,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|7.1e+03 S_Transcript_34807:208-2418(+)
MPYLSSWSYPKGLFISRIEKCVPRKWKLDIKQIGITHNQLVRLDTSGTTSRASAVNDELMVYPLLTSLKEFIAQGDLYKAFRVFSSIQLHVSSSVCYDLIVDSFSSLLIACCNHKSLSQGRQFHAQIINLGLDQHCLLLPKLVTLYSASNLLPQAHYIAKNSSFLHPLVWNILISAYIRDGHCKEALFTYNQMLSIGIRPDHFTYPSVLKACGEQADLSFGREIHKSISLSNCGGSLCVQNALILMYSKCGELKVARELFNNLSKRDKYSWNSMISGYASKGMWEDAFKLFEQMQLEGVEMNIITWNTIIGGCLQTGNYESALHLLSQMRACAINLDAVSMISGLGACSHLGVVNLGKEIHAYSVRGGCDKFHNVQNALITMYARCQDHKHAYIVFRQMEDKDIISWNSIISGYAHSNKSEEASFLFREMLFCGFEPNYVTIASILPLCARVANLQHGKELHCYIIKYHEFTDYLLLSNALVDMYARAGKISEAKRVFDSLSKKDVVTYTSLITGYGILGEGEVALKLFEEMKRSGIKPDHITMVAVLAASSHSGLVNQGQLLFEKLWSVYGIRPRVEHYACMVDLFGRAGLLKKAEEMIRMMPYQPTPDMWATLIGACHIHRNMDLGELAAEKLLAMRPKNSRYYVLIANMYAAAGCWNKLATVRTLMRDLGVMKPPGCAWVDIGSGFEPFMVADASTELSNEIYPLLYGLSAQMKDVGYFADHVIIDCDEACQE*

Click here to download the sequence:
Link to NCBI Protein BLAST