Transcript Information: S_Transcript_348078.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value1E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.3782192495574
Replicate 30
Condition 2: 8 Hour
Replicate 10.12185937324076
Replicate 20.2556782701683
Replicate 30
Condition 3: 24 Hour
Replicate 10.12482790566054
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_348078.p1 GENE.S_Transcript_348078~~S_Transcript_348078.p1 ORF type:internal len:175 (+),score=19.62,RVT_1|PF00078.23|1.3e-31 S_Transcript_348078:3-524(+)
TTTTTAGAGGGGAGGAAATTTGTGCACAATATCATGGTACTGCAGGCTATCACTAGGCATTACAAGAGGAAGAACATCACCCCTAGATGTATCATGAAGATTGATCTCAGGAAAGCTTATGACTCAGTGGATTGGGACTTTCTTAGAGAGATGCTGGAAGCTATGAATTTTCCTGAAAAATTCACCCAATGGCTCATGACATGCACATGTACTGCCTCTTATACTATTTCTCTGAATGGTGGCTACCAGGGCTACTTCAAAGGAGCTAAAGGTCTCAGACAAGGTGACCCTCTTTCCCCCCTTTTATTTGTGATATGCATGGAATATCTTTCCAGAATCCTACAGTTGGTTGGGGAACTTCGGGACTTTAAGTATCATCCTTTTTGTAAACAAATGAAAATGAATCATATTTGTTTTGCTGATGACTTAATCTTGTTCTGTGCTGGTGAGAGCAAATCTGTGAGCCTTATGTTAAGGGGATTTAAGAGTTTTTCAACCGCATCTAGATTGGAGATGAACTGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_348078.p1 GENE.S_Transcript_348078~~S_Transcript_348078.p1 ORF type:internal len:175 (+),score=19.62,RVT_1|PF00078.23|1.3e-31 S_Transcript_348078:3-524(+)
FLEGRKFVHNIMVLQAITRHYKRKNITPRCIMKIDLRKAYDSVDWDFLREMLEAMNFPEKFTQWLMTCTCTASYTISLNGGYQGYFKGAKGLRQGDPLSPLLFVICMEYLSRILQLVGELRDFKYHPFCKQMKMNHICFADDLILFCAGESKSVSLMLRGFKSFSTASRLEMNC

Click here to download the sequence:
Link to NCBI Protein BLAST