Transcript Information: S_Transcript_348092.p1


Annotated TAIR IDAT1G47570.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:17478919-17483229 | Forward length=466
E-Value1E-70
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6559200768557
Replicate 20.78445473982275
Replicate 32.1311606141049
Condition 2: 8 Hour
Replicate 11.3269131752883
Replicate 21.6903174527793
Replicate 31.7052678083985
Condition 3: 24 Hour
Replicate 12.3301209056634
Replicate 21.8131049261078
Replicate 30.6725878508031


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_348092.p1 GENE.S_Transcript_348092~~S_Transcript_348092.p1 ORF type:3prime_partial len:225 (-),score=38.63,zf-C3HC4|PF00097.21|8.3e-08,zf-C3HC4|PF00097.21|4e+02,zf-C3HC4|PF00097.21|1.4e+04,zf-C3HC4|PF00097.21|1.6e+04,zf-C3HC4|PF00097.21|9e+03,zf-RING_2|PF13639.2|9.2e-07,zf-RING_2|PF13639.2|1.6e+04 S_Transcript_348092:2-673(-)
ATGCCCATGCTGGAAGAGTCTTCTGGAAAAAAGTTGAAGATTTTCTTAGACGGTGACCACACAAAATGCAGTATATGTCTGAATGTTTGGCATGATGTTGTCACGGTTGCCCCATGCCTTCACAACTTCTGTAATGGATGCTTCTCACAATGGCTAAAGAGGTGTCAGGATAGGCATGCCACTGTTTTATGCCCCCAATGCAGAGCAGTTGTGCACTTCGCTGGGAGAAACCACTTTCTGCATGGCATTGAGGAGGATATTTTGCAGGCTGATGCTTCATCACGACATTCCGTGGACGAACTTGCACTATTAGATTCTTATGCATCCATAAAGTCCAGTCTTGTTATCACTTCAGGGGAAAGGCGTCAGAAGAGGGCATGCTCATCGATACCAGTTTATGAAGAAAGTGATGAGATGGAACTATCATGTCCTCAGTGTGGGACTGGATTTGGTGGTTTTCGTTGCAGTGAAAATACCATCCATTTGCAATGTCATGCATGCGGAGGAATGATGCCCTCAAGATCTGATATCAGCACACCACAGCATTGTTTAGGTTGTGATAGAACATTTTGTGGTGCTTATTGGCATGCTCAGGGAATTTTGGAGAGTGACTCTCATCCTATGTGCAGCCCTGATTCATTAAAACCTGTATGCTTCAACCGAGCTGGTGTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_348092.p1 GENE.S_Transcript_348092~~S_Transcript_348092.p1 ORF type:3prime_partial len:225 (-),score=38.63,zf-C3HC4|PF00097.21|8.3e-08,zf-C3HC4|PF00097.21|4e+02,zf-C3HC4|PF00097.21|1.4e+04,zf-C3HC4|PF00097.21|1.6e+04,zf-C3HC4|PF00097.21|9e+03,zf-RING_2|PF13639.2|9.2e-07,zf-RING_2|PF13639.2|1.6e+04 S_Transcript_348092:2-673(-)
MPMLEESSGKKLKIFLDGDHTKCSICLNVWHDVVTVAPCLHNFCNGCFSQWLKRCQDRHATVLCPQCRAVVHFAGRNHFLHGIEEDILQADASSRHSVDELALLDSYASIKSSLVITSGERRQKRACSSIPVYEESDEMELSCPQCGTGFGGFRCSENTIHLQCHACGGMMPSRSDISTPQHCLGCDRTFCGAYWHAQGILESDSHPMCSPDSLKPVCFNRAGV

Click here to download the sequence:
Link to NCBI Protein BLAST