Transcript Information: S_Transcript_348144.p1


Annotated TAIR IDAT5G53710.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21805409-21805753 | Reverse length=114
E-Value2E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.14867598455408
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.47654503501973
Replicate 20.62491197317672
Replicate 30.23816589502773
Condition 3: 24 Hour
Replicate 10.48815382101886
Replicate 20.50645388997424
Replicate 30.70452638003118


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_348144.p1 GENE.S_Transcript_348144~~S_Transcript_348144.p1 ORF type:complete len:179 (+),score=38.25,DUF4228|PF14009.2|2.1e-15 S_Transcript_348144:282-818(+)
ATGGGTAATTACATAGCTTTGTGCATGGTGGGAGAGTTACATTCCAAAGCACCCCTAATGAAGGAAGCTAGGCAAAAGGTTTTGCAAATCATGAAGTTTGATGGGAAGATATTGGAGTTTAGAACTACACTTTTGGTGAAAGATTTATTAGTGAATTACCCAAACTCTTATGTGGGTTTGTTCAAAGAAGCTACACAGCCCCTGCCTCTTGATTACATGTTGAAGATTGGCAAGATTTACTATCTTTTACCAACTTCAGTTGATGACACAAATCATAATACTAAGAACAAAAGCACTGAAGCTTCTTCACAATCAAGCAAAGTAGTAGAAGGAAGAGCTAAGAGGATTAAAGTTGTTATAACAAAAGAGCAACTTCAACAGCTACTTGCGAAACAGGGTCATTTTGAAGAGCTTATTATCAAAGGGGTTACACCTCCAAACAGTGTATGTAGTTCTGATGAGTTTGGCTCTTCTTCTTCTTCTAATTGGCTGCCCAAGCTTGAGCCAGTTCCTGAAGGAAACAAGATAGTTTATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_348144.p1 GENE.S_Transcript_348144~~S_Transcript_348144.p1 ORF type:complete len:179 (+),score=38.25,DUF4228|PF14009.2|2.1e-15 S_Transcript_348144:282-818(+)
MGNYIALCMVGELHSKAPLMKEARQKVLQIMKFDGKILEFRTTLLVKDLLVNYPNSYVGLFKEATQPLPLDYMLKIGKIYYLLPTSVDDTNHNTKNKSTEASSQSSKVVEGRAKRIKVVITKEQLQQLLAKQGHFEELIIKGVTPPNSVCSSDEFGSSSSSNWLPKLEPVPEGNKIVY*

Click here to download the sequence:
Link to NCBI Protein BLAST