Transcript Information: S_Transcript_3485.p3


Annotated TAIR IDAT5G54090.1
Annotated Gene NameDNA mismatch repair protein MutS, type 2
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21948283-21952550 | Reverse length=796
E-Value2E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.648851379245
Replicate 221.031818082865
Replicate 318.270374064128
Condition 2: 8 Hour
Replicate 127.105169001216
Replicate 228.85341226432
Replicate 336.25686228137
Condition 3: 24 Hour
Replicate 121.640725700962
Replicate 228.594528624364
Replicate 325.457764446285


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_3485.p3 GENE.S_Transcript_3485~~S_Transcript_3485.p3 ORF type:complete len:107 (+),score=16.42 S_Transcript_3485:3288-3608(+)
ATGTTAGTGCTGGATAGCTTTAGCTCATTGTTCAATTCCGGAGGACAAAAATGCAAAGAGAAACCATCAGTCAGAGAGATTTTATTCAAGGAGTTCCTCGAAATGCTCCGAGAGAGGTTAATCTTGTGTTCAGTGGAAAGCCCAACAGTTACTCAAATGGAACAGGCCATTTTTTTGGATAGGGATGCAAGAGGAGTTCTTGTAACTGGTCATAATACAGGAGGCAAAACAATTTACTTGAAAGCAGTAGGCCTTGCTGCCATCATTAGGAAATCAGCAATTACACTTCTGAAAGTGCGTGCGTGGAAGTTGATGCAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_3485.p3 GENE.S_Transcript_3485~~S_Transcript_3485.p3 ORF type:complete len:107 (+),score=16.42 S_Transcript_3485:3288-3608(+)
MLVLDSFSSLFNSGGQKCKEKPSVREILFKEFLEMLRERLILCSVESPTVTQMEQAIFLDRDARGVLVTGHNTGGKTIYLKAVGLAAIIRKSAITLLKVRAWKLMQ*

Click here to download the sequence:
Link to NCBI Protein BLAST