Transcript Information: S_Transcript_348791.p1


Annotated TAIR IDAT5G14230.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 Ortholog 2 in Arabidopsis thaliana (TAIR:AT5G57740.1); Has 66374 Blast hits to 25358 proteins in 1201 species: Archae - 121; Bacteria - 8133; Metazoa - 29530; Fungi - 5885; Plants - 3349; Viruses - 785; Other Eukaryotes - 18571 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:4591883-4595775 | Forward length=751
E-Value3E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.330650061759
Replicate 20.8273546084068
Replicate 30.92213680418003
Condition 2: 8 Hour
Replicate 11.3328368948208
Replicate 21.3982405399829
Replicate 30.7993442851868
Condition 3: 24 Hour
Replicate 10.27306104363243
Replicate 22.2663811576347
Replicate 31.2611022202558


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_348791.p1 GENE.S_Transcript_348791~~S_Transcript_348791.p1 ORF type:5prime_partial len:80 (+),score=10.37 S_Transcript_348791:2-241(+)
GCTGAATTACTTATGGGGTCCAACTTGATTAGCCAGCAGGTAGCAGTTCATGCCCTTGTCACTGCTTGCTCAAGGGGGTTTCTTGATGTTATTGATGTGTTGATTAAGGTAAGCTCCTCTTCTCCTGTAGTCTGTAGAGTGATAATGGAATGTCAGCCATATTTTAGCACATTTTGGACCAAAAAAGGTCTGCCTCAGATAATTTTATCACACTGTGGATACTTGGAGGATAATTTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_348791.p1 GENE.S_Transcript_348791~~S_Transcript_348791.p1 ORF type:5prime_partial len:80 (+),score=10.37 S_Transcript_348791:2-241(+)
AELLMGSNLISQQVAVHALVTACSRGFLDVIDVLIKVSSSSPVVCRVIMECQPYFSTFWTKKGLPQIILSHCGYLEDNL*

Click here to download the sequence:
Link to NCBI Protein BLAST