Transcript Information: S_Transcript_348979.p1


Annotated TAIR IDAT1G04240.1
Annotated Gene NameAUX/IAA transcriptional regulator family protein
Annotated Gene Symbol(s)SHY2, IAA3
Annotation TypeOrtholog
Chromosome Positionchr1:1128564-1129319 | Reverse length=189
E-Value2.1E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.087294214524
Replicate 23.2445278761051
Replicate 31.2656779665216
Condition 2: 8 Hour
Replicate 11.0453622704477
Replicate 20.21933184940908
Replicate 30
Condition 3: 24 Hour
Replicate 10.64249657325277
Replicate 20.44438846228132
Replicate 30.49454989029639


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_348979.p1 GENE.S_Transcript_348979~~S_Transcript_348979.p1 ORF type:3prime_partial len:102 (-),score=19.53,AUX_IAA|PF02309.12|1.9e-29 S_Transcript_348979:3-305(-)
ATGTATAGAAATAGAGAAAGAAAAACAAATCAGAAACAGATGAATGTGAAAACTTACAATTGTGTGATTCAATATTGCAGGGCACAAATTGTGGGATGGCCACCAGTCAGATCTTACAGGAAGAACAGCCTCCAGCCAAAGAAAACCGAGCAACAGCCTGACGCATCTGGAATGTATGTAAAAGTAAGCATGGATGGAGCACCATACCTAAGGAAGATTGACCTGAAGGTCTACCAAAGTTATGAAGAGCTGCTACATGCCTTGGGAAGTATGTTCAAGGTTTGCATTGGAAAATACTCAGAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_348979.p1 GENE.S_Transcript_348979~~S_Transcript_348979.p1 ORF type:3prime_partial len:102 (-),score=19.53,AUX_IAA|PF02309.12|1.9e-29 S_Transcript_348979:3-305(-)
MYRNRERKTNQKQMNVKTYNCVIQYCRAQIVGWPPVRSYRKNSLQPKKTEQQPDASGMYVKVSMDGAPYLRKIDLKVYQSYEELLHALGSMFKVCIGKYSE

Click here to download the sequence:
Link to NCBI Protein BLAST