Transcript Information: S_Transcript_348981.p1


Annotated TAIR IDAT1G04240.1
Annotated Gene NameAUX/IAA transcriptional regulator family protein
Annotated Gene Symbol(s)SHY2, IAA3
Annotation TypeOrtholog
Chromosome Positionchr1:1128564-1129319 | Reverse length=189
E-Value1.1E-78
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 150.842748628405
Replicate 255.431386699229
Replicate 355.511718062579
Condition 2: 8 Hour
Replicate 145.197095896013
Replicate 243.964578172597
Replicate 341.571205279367
Condition 3: 24 Hour
Replicate 138.799121423593
Replicate 228.639841494489
Replicate 330.492322340513


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_348981.p1 GENE.S_Transcript_348981~~S_Transcript_348981.p1 ORF type:complete len:201 (+),score=53.28,AUX_IAA|PF02309.12|2.2e-60 S_Transcript_348981:554-1156(+)
ATGGCAAGGACAACGACATACGAAAATGATCTACATCTTGATGCAACAGAGCTCAGATTAGGATTGCCGGGGAGCAACAATGAGCAGGATAAACAATCAACTTCTGCTGATGCCACTAAGAGCAACAAGAGAGCATCACCTGATATGCCTGAGGACTCTTTATCAACCAACAACTCCAGTGTCTCTGATGCCAGGAATGAAGATTGCCCTCCTCCTTCAAAGGCACAAATTGTGGGATGGCCACCAGTCAGATCTTACAGGAAGAACAGCCTCCAGCCAAAGAAAACCGAGCAACAGCCTGACGCATCTGGAATGTATGTAAAAGTAAGCATGGATGGAGCACCATACCTAAGGAAGATTGACCTGAAGGTCTACCAAAGTTATGAAGAGCTGCTACATGCCTTGGGAAGTATGTTCAAGGTTTGCATTGGAAAATACTCAGAAAGAGATGGCTACAACGGGTCAGAGTACGCCCCAACTTATGAAGACAAAGATGGTGACTGGATGCTGGTTGGAGATGTACCATGGGAGATGTTCTTCTCCTCTTGCAAGAGGCTAAGGATCATGAAATCTTCAGAAGCAAAGGGTCTTGGGTGTCTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_348981.p1 GENE.S_Transcript_348981~~S_Transcript_348981.p1 ORF type:complete len:201 (+),score=53.28,AUX_IAA|PF02309.12|2.2e-60 S_Transcript_348981:554-1156(+)
MARTTTYENDLHLDATELRLGLPGSNNEQDKQSTSADATKSNKRASPDMPEDSLSTNNSSVSDARNEDCPPPSKAQIVGWPPVRSYRKNSLQPKKTEQQPDASGMYVKVSMDGAPYLRKIDLKVYQSYEELLHALGSMFKVCIGKYSERDGYNGSEYAPTYEDKDGDWMLVGDVPWEMFFSSCKRLRIMKSSEAKGLGCL*

Click here to download the sequence:
Link to NCBI Protein BLAST