Transcript Information: S_Transcript_348982.p1


Annotated TAIR IDAT1G04240.1
Annotated Gene NameAUX/IAA transcriptional regulator family protein
Annotated Gene Symbol(s)SHY2, IAA3
Annotation TypeOrtholog
Chromosome Positionchr1:1128564-1129319 | Reverse length=189
E-Value9.4E-70
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1324681376673
Replicate 22.5035789568811
Replicate 30
Condition 2: 8 Hour
Replicate 10.75621951479195
Replicate 23.0146462706015
Replicate 32.5699958105297
Condition 3: 24 Hour
Replicate 10
Replicate 21.9288350277743
Replicate 31.0732784853241


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_348982.p1 GENE.S_Transcript_348982~~S_Transcript_348982.p1 ORF type:complete len:141 (+),score=30.26,AUX_IAA|PF02309.12|6.4e-57 S_Transcript_348982:888-1310(+)
ATGAATGTGAAAACTTACAATTGTGTGATTCAATATTGCAGGGCACAAATTGTGGGATGGCCACCAGTCAGATCTTACAGGAAGAACAGCCTCCAGCCAAAGAAAACCGAGCAACAGCCTGACGCATCTGGAATGTATGTAAAAGTAAGCATGGATGGAGCACCATACCTAAGGAAGATTGACCTGAAGGTCTACCAAAGTTATGAAGAGCTGCTACATGCCTTGGGAAGTATGTTCAAGGTTTGCATTGGAAAATACTCAGAAAGAGATGGCTACAACGGGTCAGAGTACGCCCCAACTTATGAAGACAAAGATGGTGACTGGATGCTGGTTGGAGATGTACCATGGGAGATGTTCTTCTCCTCTTGCAAGAGGCTAAGGATCATGAAATCTTCAGAAGCAAAGGGTCTTGGGTGTCTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_348982.p1 GENE.S_Transcript_348982~~S_Transcript_348982.p1 ORF type:complete len:141 (+),score=30.26,AUX_IAA|PF02309.12|6.4e-57 S_Transcript_348982:888-1310(+)
MNVKTYNCVIQYCRAQIVGWPPVRSYRKNSLQPKKTEQQPDASGMYVKVSMDGAPYLRKIDLKVYQSYEELLHALGSMFKVCIGKYSERDGYNGSEYAPTYEDKDGDWMLVGDVPWEMFFSSCKRLRIMKSSEAKGLGCL*

Click here to download the sequence:
Link to NCBI Protein BLAST