Transcript Information: S_Transcript_349103.p1


Annotated TAIR IDAT4G10890.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2439 (InterPro:IPR018838); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:6688833-6692937 | Forward length=527
E-Value3.4E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.37883275779616
Replicate 20.82441028595696
Replicate 30.22971379463559
Condition 2: 8 Hour
Replicate 10.68301961869821
Replicate 20.6767285175718
Replicate 31.0619995248033
Condition 3: 24 Hour
Replicate 10.50530869284293
Replicate 20.20163533430914
Replicate 30.44879082571381


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_349103.p1 GENE.S_Transcript_349103~~S_Transcript_349103.p1 ORF type:complete len:562 (+),score=124.32,DUF2439|PF10382.5|6.6e-18,DUF2439|PF10382.5|8.1e-19 S_Transcript_349103:107-1792(+)
ATGGGAGATGTAAAGAGATGGACAGTGACTTACACAAAACATGTGAAGCAGAAGAGGAAAGTTTATCAAGATGGCATTCTTCATCTTCTTTCTAACAGCAAGGTGATGCTCTATGATGAAACTGAGCAGCTACTAGACAGTAGGTTCTTGACGAAAGATGAAGCTGTGAAAGCTGGTGAATCGTTAGCGTTTCCTTCTTTTCTCGTCGATATTGGGGATCCTGAATGCAATCCTAACGCTATCTCTCATCCAAAAGTCAAAACCGAAAATGAGAATACAACTCCTGAGAAAAATAGGTTGCCACAAGGACAGAAGTTCAGAAGTTCTTTTGTACTGAATTCTAAGGGGTTAGGAAAGGCTAATTCAGTGCGAAAAAAGGCCTCAGCTATTAACTTAAGCCCTTCTCAGAAGATTATTCGAGAGTTTAAGAAAAATGAAGTACAAAAGTATAGTGTGCATCAGAGTCCTACAAGCACAGTAACCTCTTCCTATAAAGAATGGGAGGCATTGTATACAACTCAAATCACGCAAAAGGCCAAGAAATATTATGATGGTTTCATACGTGTGGTGATTTGTGGCTCCTATGGGAGGCAGGTAATGCTGTATGATTCCAGCAAAAATCAACTGGATAAAAGATTCCTAAAGAAGGACGAAGCGATCAGTTCTGGTCAATCGTTGACATTTGATGCTTATTTGGTTGATGTTGGAAATCCTATGGGAACCAAGGAAAATGATACTGATATCATGGCAGATGAACAAAAATGCAAGACGAATGGAAAAGGAGACACACTTACTGGCCGGCAATGGCAGAAGTCACTTGATTATTCAGCTTCTGATTCACACAGAAGGAAGGTGCCTGATAAACAGGATCATCAGAGGGCTTGTAATTTTGTTGTGATAGGACAATCTCGGCAGCATGCTGGTTCTGGTAAATGTGTTGCCTCGAATTCATTTGGTTTGGTTGTGAATCAGATGAATCTCGGGAAAAGAGATCCTTCTTATATGCCTATACGTGATGCATCTCAAATTCTATCCGTCTTGAAGAAACCTGTAGCTATGGAAAAAACTCCCATTGTGCAAGAAGCAGTTGAGAAATGCTTTTCACAATCTTCAGAGTTGGTTCAGTTGGATAGTCCAGGTGAGGAAGTTCAGGGCTCCCTTTCAGTTGATCCACATCCACCAAGAAGGGTAGCACAGAAGCATAAAGATGAGAAGGCTGGAAATGAAGGATATTATAGGACATCCGGTGAATGCAGTAGTTCCCATCATCATGATACATCAAAGATGGTAGCTAATGCAAACAGCAGCAGTCCAAAGATAGAAATTCCAATTTCCACCCGAGGGACTCAAGTAGCCAAATCAAGATCTCCCAAGAAGAACCGACCTGCTGATATTGGATCAGCATTCTTCAAGAGACTTAAAGCAAGTATCAAGCAAGGAAGATCGGTCATCTCACAGACTTCCTTAGTAGCAGACTCCATGGGGGATATTTCTGGTGCGAGTAGTGCAGCTGGAACTCATTCTCATCAGCCTCATACAGCAGTGCTGGAGACAGACCCAACAATTAAAGCAGCAGCGGATTCCACCTTAGATATGCCCAAGCCGAAATGTTCTGCTGAAGATCCTCTCAAAGCAAAGAAATCAATTGATGATTTTGACTGCCCAAGCTTTGACTTGGGTTTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_349103.p1 GENE.S_Transcript_349103~~S_Transcript_349103.p1 ORF type:complete len:562 (+),score=124.32,DUF2439|PF10382.5|6.6e-18,DUF2439|PF10382.5|8.1e-19 S_Transcript_349103:107-1792(+)
MGDVKRWTVTYTKHVKQKRKVYQDGILHLLSNSKVMLYDETEQLLDSRFLTKDEAVKAGESLAFPSFLVDIGDPECNPNAISHPKVKTENENTTPEKNRLPQGQKFRSSFVLNSKGLGKANSVRKKASAINLSPSQKIIREFKKNEVQKYSVHQSPTSTVTSSYKEWEALYTTQITQKAKKYYDGFIRVVICGSYGRQVMLYDSSKNQLDKRFLKKDEAISSGQSLTFDAYLVDVGNPMGTKENDTDIMADEQKCKTNGKGDTLTGRQWQKSLDYSASDSHRRKVPDKQDHQRACNFVVIGQSRQHAGSGKCVASNSFGLVVNQMNLGKRDPSYMPIRDASQILSVLKKPVAMEKTPIVQEAVEKCFSQSSELVQLDSPGEEVQGSLSVDPHPPRRVAQKHKDEKAGNEGYYRTSGECSSSHHHDTSKMVANANSSSPKIEIPISTRGTQVAKSRSPKKNRPADIGSAFFKRLKASIKQGRSVISQTSLVADSMGDISGASSAAGTHSHQPHTAVLETDPTIKAAADSTLDMPKPKCSAEDPLKAKKSIDDFDCPSFDLGF*

Click here to download the sequence:
Link to NCBI Protein BLAST