Transcript Information: S_Transcript_34927.p1


Annotated TAIR IDAT1G20080.1
Annotated Gene NameCalcium-dependent lipid-binding (CaLB domain) family protein
Annotated Gene Symbol(s)SYTB, ATSYTB, NTMC2TYPE1.2, NTMC2T1.2, SYT2
Annotation TypeOrtholog
Chromosome Positionchr1:6962236-6964912 | Forward length=537
E-Value2.2E-290
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1111.78448014183
Replicate 2121.20207769908
Replicate 3115.6178204573
Condition 2: 8 Hour
Replicate 1190.26679412819
Replicate 2186.86096952885
Replicate 3194.84820250416
Condition 3: 24 Hour
Replicate 1101.19976637479
Replicate 2115.0430212855
Replicate 3114.59886224143


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_34927.p1 GENE.S_Transcript_34927~~S_Transcript_34927.p1 ORF type:complete len:539 (+),score=112.88,C2|PF00168.26|3.3e-23,C2|PF00168.26|1.3e-16,SMP_LBD|PF17047.1|2.8e-14,NT-C2|PF10358.5|17,NT-C2|PF10358.5|0.0006 S_Transcript_34927:52-1668(+)
ATGGGGTTTGTGAGTACAATCCTGAGTTTCTGTGGATTTGGATTTGGAAGTTGCATTGGACTTGCTATGGGCTACTATTTCTTCATATTCTTCCAGTCTTTTGATGTCAAGGATCCTGAAATCCGTCCATTGGCTGAGCTAGACGCAGAAACCATACAAAAGTTGCTTCCCGAAATACCCCTTTGGGTGAAAAATCCGGATTTTGACCGTGTTGACTGGCTTAACAAGTTCATACAACTTATGTGGCCTTATTTGAATAAGGCAATTTGCAAGACTGTGAGGGATGTAACAAAGCCCATCATTGCTGAGCAAACTCCGAAGTTCAAAATTCAGTCAGTTGAATTTCATACTCTTAGTTTGGGCACCCTGCCTCCAACTTTTCAAGGAATGAAGGCCTTTATGACTGATGAAAAAGAGTTGATTATGGAACCAGCAATGAAGTGGGCGGGGAACCCAAACATTGTCGTTAAAGTCAAAGCCTTTGGATTGACTGTTTCTGTTCAGGTCGTTGATTTGCAAGTATTTGCTCATCCCCGTATTACATTGAAGCCTCTGGTGCCAGCTTTTCCTTGTTTTGCCAATATATATGTTTCTCTTATGGAGAGGCCACATGTCGACTTTGGACTAAAATTACTCGGCGCAGATGCTATGGCTATTCCCGGCTTGTATAGATTTGTTCAGGAAACTATAAAAGATCAAGTAGGAAAGATGTATCTATGGCCTAAAACCCTTGAAGTACCTATATTGGATCCTAAAATGGCTAACAAGAGGCCCATAGGAGTTTTACATGTCAAGGTTGTGAATGCAATGAATCTAAAAAAGAAGGATTTTCTTGGCGCATCTGACCCTTATGTTAAGATGAAACTTACAGAAGACAGGGCTCCTTCAAAGAAAACTACTGTAAAGCACAGAAACTTAAATCCTGAGTGGAATGAAGAATTCACACTGTCTGTAAGAAATCCAGAGTCTCAAGTCCTAGAGCTCTTCGTCTATGATTGGGAAAAGCTTGGCAAACATGAGAAGATGGGCGTGAATGCAGTTCCACTGAAAGATCTTACACCAGATGAAACAAAAGTTTTAACTCTGGATCTACTGAAAAGCATGGATCCTGATGATGCTCGAAATGATAAGTCACGTGGGCAGCTTGTTTTGGAAGTGACATACAAACCATTCAAAGATGATGAAATGCCTGCCAATGATGAAGATTCTGGAACAGTTGAGAAGGCTCCTGAAGGGACACCTGCTGAAGGTGGTTTGCTTGTAGTCAATGTTTATCAAGCTCAAGATGTTGAAGGAAAGCACCACACTAATCCTTATGTACGTCTACTATTGAAAGGCGAAGAGAAGAAAACTAAGACTATAAAAAAAAACAGAGACCCTAGATGGAACGAGGAATTTGAGTTCATACTGGAGGAACCACCAACTGATGATAAACTCCGGGTGGAAGTGCTAAGTGTCTCATCCAGGATAGGCTTGCTTCATCCAAAGGAAATGCTGGGATATGTTGACATTAATCTGGCAGATGTGGTTAACAATAGAAGAATCAATCAGAATTACAATCTTATTGAATCCAAAAATGGCCGGATTCAGATCGAGTTGCAGTGGAGGACATCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_34927.p1 GENE.S_Transcript_34927~~S_Transcript_34927.p1 ORF type:complete len:539 (+),score=112.88,C2|PF00168.26|3.3e-23,C2|PF00168.26|1.3e-16,SMP_LBD|PF17047.1|2.8e-14,NT-C2|PF10358.5|17,NT-C2|PF10358.5|0.0006 S_Transcript_34927:52-1668(+)
MGFVSTILSFCGFGFGSCIGLAMGYYFFIFFQSFDVKDPEIRPLAELDAETIQKLLPEIPLWVKNPDFDRVDWLNKFIQLMWPYLNKAICKTVRDVTKPIIAEQTPKFKIQSVEFHTLSLGTLPPTFQGMKAFMTDEKELIMEPAMKWAGNPNIVVKVKAFGLTVSVQVVDLQVFAHPRITLKPLVPAFPCFANIYVSLMERPHVDFGLKLLGADAMAIPGLYRFVQETIKDQVGKMYLWPKTLEVPILDPKMANKRPIGVLHVKVVNAMNLKKKDFLGASDPYVKMKLTEDRAPSKKTTVKHRNLNPEWNEEFTLSVRNPESQVLELFVYDWEKLGKHEKMGVNAVPLKDLTPDETKVLTLDLLKSMDPDDARNDKSRGQLVLEVTYKPFKDDEMPANDEDSGTVEKAPEGTPAEGGLLVVNVYQAQDVEGKHHTNPYVRLLLKGEEKKTKTIKKNRDPRWNEEFEFILEEPPTDDKLRVEVLSVSSRIGLLHPKEMLGYVDINLADVVNNRRINQNYNLIESKNGRIQIELQWRTS*

Click here to download the sequence:
Link to NCBI Protein BLAST