Transcript Information: S_Transcript_34978.p1


Annotated TAIR IDAT1G65660.1
Annotated Gene NamePre-mRNA splicing Prp18-interacting factor
Annotated Gene Symbol(s)SMP1
Annotation TypeOrtholog
Chromosome Positionchr1:24418295-24421231 | Reverse length=535
E-Value3.5E-305
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.7665076839129
Replicate 21.5229910702016
Replicate 34.3698273929427
Condition 2: 8 Hour
Replicate 18.6733863603265
Replicate 211.728525126424
Replicate 36.084560976795
Condition 3: 24 Hour
Replicate 15.2574439744154
Replicate 23.3403752136781
Replicate 34.5173810874835


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_34978.p1 GENE.S_Transcript_34978~~S_Transcript_34978.p1 ORF type:complete len:536 (+),score=151.15,Slu7|PF11708.4|3.5e-95 S_Transcript_34978:236-1843(+)
ATGGCTACCGCTTCAGTGGCATTTAAATCTAGGGAAGACCATAGGAAGCAGCTGGAATTGGAGGAAGCTCGTAAAGCTGGGCTTGCTCCAGCTGAAGTCGATGAAGATGGAAAAGAAATTAATCCTCACATTCCACAGTATATGTCTTCAGCTCCTTGGTACCTGAATTCTGATAAACCTAGTTTGAAACATCAAAGGAAATGGAAATCTGATCCTAATTACACGAAATCTTGGTATAATAGAGGTGAAAAAGGTTACCAGGCTGAAAAGTACCGGAAGGGTTCATGTGCAAATTGTGGAGCTATGACACATGATGCAAAGTCATGCATGGACAGGCCTAGGAAAGTGGGGGCAAAGTGGACAGGGAAGCATATTGCCCCAGATGAGATTATAGAGGAGTTTGAGCTGGACTTTGACGGAAAACGTGATAGGTGGAATGGTTTTGATCCAGCAAGTTATGCCTATGTTGTCCACCGGTATGAAGCAAAGGAAGAAGCCAGGAGAAAATTCCTTAAGGAGCAGCAGTTGAAAAAGCTTGAAGAGAAGAACAATAAAACAGGTGAGGAGGTTGGTGTCAGTGACGAGGAGGACGATGATGATGAAGATGCTCTGAAGGTCGATGAGGCCAAGGTTGATGAAAGCAAGCAAATGGACTTTGCCAAGGTTGAGAAGCGTGTTCGTACAACTGGTGGAGGAAGTACTGGAACTGTAAGAAACCTGCGTATTCGAGAGGATACTGCGAAATATCTATTGAATCTCGATGTCAATTCAGCCTACTATGATCCTAAAACACGGTCCATGCGTGAAGATCCTCTCCCGGATGCCGATCCCAATGAGAAATTTTATGCTGGTGATAATCAAAATAGGCTTAGTGGTCAAGCTCTGGAGTTCAAGAGTCTTAATTTACATGCTTTTGAGGCATTTGACAAGGGGCAAGATGTTCACTTGCAAGCAGCGCCATCCCAAGCTGAGTTGCTCTACAAGAATTTCAAAGTCAATAAAGATAAATTGAAGTCTCATATGAAGGACACAATCATGGAGAAGTATGGCAATGCTGCAGCAGAAGAGGAGATTCCACGAGAGCTTCTCCTTGGTCAAAGTGAAAGACAAGTTGAATATGATCGTGCTGGTCGGATTATCAAGGGGCAGGAGACTGCACTCCCCAAAAGTAAATACGAAGAAGATGTATACACAAATAATCACACTAGTGTTTGGGGATCATGGTGGAAAGATTTCCAGTGGGGCTACAAATGCTGTAGGCAGACCATTCGAAACAGCTATTGTACGGGTGCTGCTGGAATTGAGGCTGCAGAAGCATCAGGAGAGCTGATGAAAGCTAATATTGCACGCAAAGAAGCCTCTGAAGAAAAAGCTGCGCCTACCGAGGAGAAGAGGCTGGCTACTTGGGGAACAGATGTGCCAGAAGATTTGGTTCTGGATCAGAAGAAATTAGCTGATGCTCTGAAGAAGGTAAATATTTGTCTTTCTGTATCTTCAATAGCTCCCCTTTCACCCGCTGCCCCCTTTTCCTGCATCCGGTTGCATTTATACAGCAGCTGGTTCTCAAATAAAACAGAGGTAAAACGTGAAACTTTGTCTTTCGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_34978.p1 GENE.S_Transcript_34978~~S_Transcript_34978.p1 ORF type:complete len:536 (+),score=151.15,Slu7|PF11708.4|3.5e-95 S_Transcript_34978:236-1843(+)
MATASVAFKSREDHRKQLELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNSDKPSLKHQRKWKSDPNYTKSWYNRGEKGYQAEKYRKGSCANCGAMTHDAKSCMDRPRKVGAKWTGKHIAPDEIIEEFELDFDGKRDRWNGFDPASYAYVVHRYEAKEEARRKFLKEQQLKKLEEKNNKTGEEVGVSDEEDDDDEDALKVDEAKVDESKQMDFAKVEKRVRTTGGGSTGTVRNLRIREDTAKYLLNLDVNSAYYDPKTRSMREDPLPDADPNEKFYAGDNQNRLSGQALEFKSLNLHAFEAFDKGQDVHLQAAPSQAELLYKNFKVNKDKLKSHMKDTIMEKYGNAAAEEEIPRELLLGQSERQVEYDRAGRIIKGQETALPKSKYEEDVYTNNHTSVWGSWWKDFQWGYKCCRQTIRNSYCTGAAGIEAAEASGELMKANIARKEASEEKAAPTEEKRLATWGTDVPEDLVLDQKKLADALKKVNICLSVSSIAPLSPAAPFSCIRLHLYSSWFSNKTEVKRETLSFA*

Click here to download the sequence:
Link to NCBI Protein BLAST