Transcript Information: S_Transcript_349808.p1


Annotated TAIR IDAT3G01680.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28 (InterPro:IPR021640); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01670.1); Has 122 Blast hits to 112 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:252033-255246 | Forward length=740
E-Value2E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.3748310033124
Replicate 20
Replicate 30.2597568462479
Condition 2: 8 Hour
Replicate 10.15017880505023
Replicate 20
Replicate 30.30022320570396
Condition 3: 24 Hour
Replicate 10
Replicate 20.15960430687569
Replicate 30.35524006204389


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_349808.p1 GENE.S_Transcript_349808~~S_Transcript_349808.p1 ORF type:5prime_partial len:142 (+),score=27.41,SEO_C|PF14577.2|4.3e-33 S_Transcript_349808:2-427(+)
CAAGAACCAGCAAGCATAAGATATATATGGGAGAAATGGCACATTGAAAACAAGACAAGTGTTGTTGTGTTAGACCCACAAGGGAAAGTTATATGCAAAAATGCCATTCACATAATCTTCATTTGGGGAAATATGGCCTTCCCTTTTACTACTCTAAAAGATGAAGATCTTTGGAAGGACAAGACCTGGAACCTTGAGCTACTTGTGGACTTTGATCCTACTATAAATGAATGGATACAAAATGGAAAACATATATGCTTATATGGAGGGGATGACATAGAGTGGATAAGAAAATTCACAAGCAAGGCAAAAGAAGTAGCCACAAATGCTGGAGTAGCCCTAGAGCTAGTGTACATTGGGAAAAGCAATGCAAATGATGAGCAATCAAAGGAAATCATAAAGACCATTGAACCAACCTGTTGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_349808.p1 GENE.S_Transcript_349808~~S_Transcript_349808.p1 ORF type:5prime_partial len:142 (+),score=27.41,SEO_C|PF14577.2|4.3e-33 S_Transcript_349808:2-427(+)
QEPASIRYIWEKWHIENKTSVVVLDPQGKVICKNAIHIIFIWGNMAFPFTTLKDEDLWKDKTWNLELLVDFDPTINEWIQNGKHICLYGGDDIEWIRKFTSKAKEVATNAGVALELVYIGKSNANDEQSKEIIKTIEPTCC*

Click here to download the sequence:
Link to NCBI Protein BLAST