Transcript Information: S_Transcript_35027.p1


Annotated TAIR IDAT3G12640.1
Annotated Gene NameRNA binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:4014455-4017675 | Forward length=638
E-Value1.8E-133
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.098747491035
Replicate 216.698753890854
Replicate 317.321759360719
Condition 2: 8 Hour
Replicate 118.362673283204
Replicate 216.738416420751
Replicate 316.256804179197
Condition 3: 24 Hour
Replicate 117.102868261088
Replicate 213.906593499814
Replicate 314.271808049784


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_35027.p1 GENE.S_Transcript_35027~~S_Transcript_35027.p1 ORF type:complete len:691 (+),score=157.45,RRM_1|PF00076.18|1.5e-16,RRM_6|PF14259.2|5.2e+03,RRM_6|PF14259.2|2.3e-08,RRM_5|PF13893.2|5.8e-06,PWI|PF01480.13|1e-05 S_Transcript_35027:507-2579(+)
ATGGAAGGCACATTTAGGATTAATTTCAGCGTAGATGGGACCGCTAAACTCGCAGAACGCTTGACGGATGTTCTCAAGGATTACATGGGGGAATTCGTTGACGACACTTTTGTGAAATATGTCATAGTTTTACTGGGCAATGGCAGGAGCAAGGAAGAAGTTAGGGAGGACCTTGATGTTTTTCTTGGAGACAAGACGGATTCTTTCGTTACATGGCTATGGGACCATCTTGCCTCAAATTTAGACCAGTATGTACAATCTCAGGCGTCGCACGTGGAGGATGAAGTGGCGAAAGCTAAACCCGAGCTGGTAGAGAAGGCTGATAAAGTTGATTCTGATCGTCCAGTTACAGACCCTGAAAGAGTTCAGTCTAACAGGTCTTCTAGAAGCAGGCACAATAGGGAATGGAAAGGACTTGTGACAGACGACACTCAACCTCCTCCACTTCGCAGTTCTGTTGCTGATCATATTCAGGATGAACCAAAAGCTCATCGTAGTGCTCTGCGCACCAAGCGATCTGTTTCTCCTGAGCCTCCTGTTCGTAGGAAAAGAGCTCGTCCTGATGAACCTCCCCGGCCAAAGAGAGAGGTATCTCAGGCAACCATCAATGCTCCCCGTAGGCTGCTGCAATTTGCTGTGAGAGAGGCAGTTGCAACTTCAAGATCCTCGAACTCGGTTGTAGAGCCTGTCCAGAAGCGACTTCGCTCTGTGGTTTCTACAACTACTGGTAATCCTACAGAAGAAGTTCATCCTCGGAAAGTACAGTCAGTGGCCAGGTTGCCAAACACTATGGCGACAGCTATCAAAGCTGTGGCAGAGGCTGCTGAAGATGTGAGAAAGGGGAGGACCGGAAATGTCTTTGATCGGTTGAGTCGTGGTGCTGATATCGTAGAAAGCAGTGAGCAAGTTTTACCACTCGAAGATTCTGCAATCCAAGATGATGAATATGAATATTATAGTCAAAATCATGCTCATCAGAGATATTTGCGCAAACCACACGACAGTGGACGGTTTAATAATGCATTTATGATGGATAGCAGCACAGGCCTGGCTTCTGATTCTGCATCTGATAATGAGGGATATGAAGATGTTAATGTTACGGGCCACAGGGTAAAGTGTGTATCTGAGACAGGTACTTCTGGTGCAAACAAAGTTGATGATTCATTGATGGTGCAGTATAGTGTTGCCCAGAATACAGATATGATTCGTCCATCTCAGAGGAGAGATCTGGAACCACCAGTTTCGGCAGCAAACGCTAAGCATAAGATTGTGAATATCTCAGTGAATGTAAATACATGGAAACCACCTCATTATCAACCACCCAGAGAAAATGTGGAAGCTGATACTCAAAAGACTCTGCAGGAGACTGATATTGGAGCTGGCAATTCTAATGTACGAGTCATGAAGGAAAATAGCAACCCACTTACTCTTATGGCCAATGGAAAACCTCCTGCAGACACCCAGAATGAAAGCCTGAAAACTGTGATGTCCATGGGTTCTGGGCAACTTTCTACTGGCCGTCCTCTGGAAGATGCTGATTCACGAACAATTTTTGTCAATAATGTTCATTTTGCTGCTACCAAGGATACTCTGTCTCGGCATTTCAACAAATTTGGAGAAGTGCTGAAAGTGATAATTTTAACTGATGCGGCTACAGGTCATCCAAAAGGGTCAGCGTATGTGGAATTTATGCGGAAGGAAGCAGCGGAAAATGCGTTGTCCTTGGATGGGACATCCTTCATGTCACGCATTATCAAGGTTGTGAAGAAAAGCTCTGCCCAACAGGAAGCCAGTCCTACGTTGACATGGCCCCGTATTACCCGGGGTTCTCCCTTTTCTGTTCCTAGATTTGCCCAGTCTCCTTTTCCGAGAGTCTTTCCTGGTGCTTTTAGAGCACGCCCGCCTCTTAAATCTGGTGCAAGGAGTATGCAGTGGAAGCGGGATGCACAGCAGACAACTTCTGACAGTGTCGTCTCAGTTTCTGGAAACACTGCGAATGCTGCACCAGCTGGTCGTGGTCTCACGTATGTTCGTCAAGAGTCCAAGACAGACGGAAATGCTGGTGGTGCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_35027.p1 GENE.S_Transcript_35027~~S_Transcript_35027.p1 ORF type:complete len:691 (+),score=157.45,RRM_1|PF00076.18|1.5e-16,RRM_6|PF14259.2|5.2e+03,RRM_6|PF14259.2|2.3e-08,RRM_5|PF13893.2|5.8e-06,PWI|PF01480.13|1e-05 S_Transcript_35027:507-2579(+)
MEGTFRINFSVDGTAKLAERLTDVLKDYMGEFVDDTFVKYVIVLLGNGRSKEEVREDLDVFLGDKTDSFVTWLWDHLASNLDQYVQSQASHVEDEVAKAKPELVEKADKVDSDRPVTDPERVQSNRSSRSRHNREWKGLVTDDTQPPPLRSSVADHIQDEPKAHRSALRTKRSVSPEPPVRRKRARPDEPPRPKREVSQATINAPRRLLQFAVREAVATSRSSNSVVEPVQKRLRSVVSTTTGNPTEEVHPRKVQSVARLPNTMATAIKAVAEAAEDVRKGRTGNVFDRLSRGADIVESSEQVLPLEDSAIQDDEYEYYSQNHAHQRYLRKPHDSGRFNNAFMMDSSTGLASDSASDNEGYEDVNVTGHRVKCVSETGTSGANKVDDSLMVQYSVAQNTDMIRPSQRRDLEPPVSAANAKHKIVNISVNVNTWKPPHYQPPRENVEADTQKTLQETDIGAGNSNVRVMKENSNPLTLMANGKPPADTQNESLKTVMSMGSGQLSTGRPLEDADSRTIFVNNVHFAATKDTLSRHFNKFGEVLKVIILTDAATGHPKGSAYVEFMRKEAAENALSLDGTSFMSRIIKVVKKSSAQQEASPTLTWPRITRGSPFSVPRFAQSPFPRVFPGAFRARPPLKSGARSMQWKRDAQQTTSDSVVSVSGNTANAAPAGRGLTYVRQESKTDGNAGGA*

Click here to download the sequence:
Link to NCBI Protein BLAST