Transcript Information: S_Transcript_350656.p1


Annotated TAIR IDAT1G71060.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:26805651-26807183 | Reverse length=510
E-Value1.1E-204
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.91437074768251
Replicate 21.1968963593588
Replicate 30.76705773946259
Condition 2: 8 Hour
Replicate 13.2007367022098
Replicate 23.5600771795587
Replicate 33.2763961056481
Condition 3: 24 Hour
Replicate 10.90855754120012
Replicate 21.0245846101423
Replicate 31.5507224408209


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_350656.p1 GENE.S_Transcript_350656~~S_Transcript_350656.p1 ORF type:complete len:553 (+),score=86.16,PPR_2|PF13041.2|0.022,PPR_2|PF13041.2|11,PPR_2|PF13041.2|2.2e-10,PPR_2|PF13041.2|8.3e-06,PPR_2|PF13041.2|1.3e-14,PPR_2|PF13041.2|0.019,PPR_2|PF13041.2|4.4e-11,PPR_2|PF13041.2|3.3e-10,PPR_2|PF13041.2|0.012,PPR_2|PF13041.2|1e-07,PPR_1|PF12854.3|9.5,PPR_1|PF12854.3|1.8e+02,PPR_1|PF12854.3|0.0038,PPR_1|PF12854.3|11,PPR_1|PF12854.3|1.4e-11,PPR_1|PF12854.3|0.012,PPR_1|PF12854.3|2.4e-06,PPR_1|PF12854.3|0.0023,PPR_1|PF12854.3|5.1e-06,PPR_1|PF12854.3|7.6e-06,PPR|PF01535.16|0.087,PPR|PF01535.16|30,PPR|PF01535.16|0.062,PPR|PF01535.16|0.024,PPR|PF01535.16|3.4e-07,PPR|PF01535.16|0.052,PPR|PF01535.16|4.6e-06,PPR|PF01535.16|0.012,PPR|PF01535.16|0.052,PPR|PF01535.16|5.5e-05,PPR_3|PF13812.2|0.033,PPR_3|PF13812.2|3.9,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|0.089,PPR_3|PF13812.2|1.1e-05,PPR_3|PF13812.2|2.2e+02,PPR_3|PF13812.2|0.58,PPR_3|PF13812.2|0.018,PPR_3|PF13812.2|0.0091,PPR_3|PF13812.2|0.0048,ATP13|PF12921.3|7.7e+02,ATP13|PF12921.3|0.33,ATP13|PF12921.3|22,ATP13|PF12921.3|3.6 S_Transcript_350656:10-1668(+)
ATGGGTTCATCTAAGATACGAACCCATGTATTGAAAACACCAGCAAAATGCATTGCTTCTTGTGTCCTTCCTCTGCTTCAAACTCTTTCCTATTCAACTTCACCCTTGCAAAACCAATTCCCTTTCAAGAAACATCTGATTGAAGGAAATTTATCATCTTGTATTTCACCAAAAAAGCTATGTTCTTGCCCATTTCCAACGACAGTGGCTGCAATACATCATGGAACTATGATGAATACCTACTTTTTAGAAGAAACAGAGGAACAAAATTCACCAAATTTCATCACCAACCAATTAGTCAAAGATTCAGATGAAATCTGTTCATTATTGTCAACTTTACCCAAAAACTCCAGCATTGAATCTGTTCTTGAAAAATGTGGAATAGAGGTCACACCCATCTTGGTTTTGGAGGTTCTAAAGAAGCTAAGCAATGCAGGGTTTCTAGCTATAGATTTTTTCAAATGGGCAGAACAGCAAAAGGGGTTCAGATACACAACAGAGAGTTACAATGCCTTGATTGATTCTTTAGGTAAAATCAAACAATTCAAAATGATTTGGGTATTGGTTAGTTCTATGAGAAGTAAAGAACTATTGAGTAAAGATACAATCTTTTTAATTATAAGAAGGTATGCCAGGCCGAGGAGAGTTGAAGATGCAATTGAGACATTTGAGAAGATAGAGCAGCTGGGTATGAAGCTTGATTTGTCAGATTTCAATAGGTTTCTTGACACATTGTGTAAATCCAGACAAGTTGCGAAAGCGCACCAGATGTTTGATAAAATGACAAAGAGAAGATTTAAGCCTGATAAGAAGTCTTATACTATACTCTTGGAAGGGTTTGGTCAACAGCAGAATTTACTGAAGTTAGATGAAGTATACCGAGAGATGAAAGATGAGGGATTTGAGCCTGATGTTGTAGCTTATGGGATTATAATGAATGCATATTGTAAGGCGAGGAAGGTTGATCGAGCATTGGAGATGTTTCGAGAAATGGAAGCAACGAACATTGAACCTTCTCAGCATATTTATTGTATTCTGATTAATGGGTTAGGTTCTTATAAGAGATTGAATGAAGCCCTGAAGTTTTTCGAGTTGTCAAAAGCTAGTGGTACTGCTCCTGAGATAGCAACGTACAATGCAGTGGTTGGATCATATTGTTGGTCGATGAAATTTGATGAAGCATTTCAGTTAGTTGATGAAATGAGAAGATGTAGGGTTGGTCCTAATTCAAGAACGTATGACATAATTCTTCATCACTTGATAAGGGCTGGAAAAATCAGAGAAGCTTATTCAGTTTTTGAGAGGATGAGCAACAACCAAGGTTGCGAACCGACTGTGAGCACATACGAGATTATAGTTAGAATGTTCTGCAATATTAGACAAATGAATAGGGCAGTACATGTATGGGATCAGATGAAGGCTAAGGGGATTCTTCCTGGAATGCATATGTTTGCAACATTGATCAACAGCTTTTGCCATGAAAATAAGCTGGAAGGTGCTTGCAAATATTTCAATGAAATGCTGGATTTGGGGCTTAGACCTCCAGGTTCTACATTTAGCAATCTTAAACGAGCTCTTCTTGATGAAGGGAGGAAGGAAACTGTTATAGTTTTGACTCGGAAACTTGAGGCAATAAGGACTACTACGGTTATTGGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_350656.p1 GENE.S_Transcript_350656~~S_Transcript_350656.p1 ORF type:complete len:553 (+),score=86.16,PPR_2|PF13041.2|0.022,PPR_2|PF13041.2|11,PPR_2|PF13041.2|2.2e-10,PPR_2|PF13041.2|8.3e-06,PPR_2|PF13041.2|1.3e-14,PPR_2|PF13041.2|0.019,PPR_2|PF13041.2|4.4e-11,PPR_2|PF13041.2|3.3e-10,PPR_2|PF13041.2|0.012,PPR_2|PF13041.2|1e-07,PPR_1|PF12854.3|9.5,PPR_1|PF12854.3|1.8e+02,PPR_1|PF12854.3|0.0038,PPR_1|PF12854.3|11,PPR_1|PF12854.3|1.4e-11,PPR_1|PF12854.3|0.012,PPR_1|PF12854.3|2.4e-06,PPR_1|PF12854.3|0.0023,PPR_1|PF12854.3|5.1e-06,PPR_1|PF12854.3|7.6e-06,PPR|PF01535.16|0.087,PPR|PF01535.16|30,PPR|PF01535.16|0.062,PPR|PF01535.16|0.024,PPR|PF01535.16|3.4e-07,PPR|PF01535.16|0.052,PPR|PF01535.16|4.6e-06,PPR|PF01535.16|0.012,PPR|PF01535.16|0.052,PPR|PF01535.16|5.5e-05,PPR_3|PF13812.2|0.033,PPR_3|PF13812.2|3.9,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|0.089,PPR_3|PF13812.2|1.1e-05,PPR_3|PF13812.2|2.2e+02,PPR_3|PF13812.2|0.58,PPR_3|PF13812.2|0.018,PPR_3|PF13812.2|0.0091,PPR_3|PF13812.2|0.0048,ATP13|PF12921.3|7.7e+02,ATP13|PF12921.3|0.33,ATP13|PF12921.3|22,ATP13|PF12921.3|3.6 S_Transcript_350656:10-1668(+)
MGSSKIRTHVLKTPAKCIASCVLPLLQTLSYSTSPLQNQFPFKKHLIEGNLSSCISPKKLCSCPFPTTVAAIHHGTMMNTYFLEETEEQNSPNFITNQLVKDSDEICSLLSTLPKNSSIESVLEKCGIEVTPILVLEVLKKLSNAGFLAIDFFKWAEQQKGFRYTTESYNALIDSLGKIKQFKMIWVLVSSMRSKELLSKDTIFLIIRRYARPRRVEDAIETFEKIEQLGMKLDLSDFNRFLDTLCKSRQVAKAHQMFDKMTKRRFKPDKKSYTILLEGFGQQQNLLKLDEVYREMKDEGFEPDVVAYGIIMNAYCKARKVDRALEMFREMEATNIEPSQHIYCILINGLGSYKRLNEALKFFELSKASGTAPEIATYNAVVGSYCWSMKFDEAFQLVDEMRRCRVGPNSRTYDIILHHLIRAGKIREAYSVFERMSNNQGCEPTVSTYEIIVRMFCNIRQMNRAVHVWDQMKAKGILPGMHMFATLINSFCHENKLEGACKYFNEMLDLGLRPPGSTFSNLKRALLDEGRKETVIVLTRKLEAIRTTTVIG*

Click here to download the sequence:
Link to NCBI Protein BLAST