Transcript Information: S_Transcript_350698.p1


Annotated TAIR IDAT5G54090.1
Annotated Gene NameDNA mismatch repair protein MutS, type 2
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21948283-21952550 | Reverse length=796
E-Value1.1E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.19798096141351
Replicate 30.94317909756555
Condition 3: 24 Hour
Replicate 10.38663510602821
Replicate 20
Replicate 30.89281573115455


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_350698.p1 GENE.S_Transcript_350698~~S_Transcript_350698.p1 ORF type:5prime_partial len:113 (+),score=12.06 S_Transcript_350698:1-339(+)
CTCCTGGGCAGCAATGAAGCCTTTGAGAACGCATGTGTGGAGTTTGATGAAGTCAACTTGAAGCCAACTTATAAGATTCTTTGGGGAGTTCCAGGTCTCTCTCAAAACTCTCTATGTTCAGCTTGTGAATTTCTCACATCTTGGCCTGCTTTACCTCTGTTGAGTTTGATGATCTTATTGTCCATAGATTCCATGCATTATTCTGTTCTTGTTAAGTGTTTGATCATTGTATATTCAATTGATATGGGATGCATGCTAGGAAGGTTTATGGTGCATGTCTTTAGTACTTTCCTTACTTTTTTGCTCTTTAGATCCAGTCCAACATCCCCTTTCACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_350698.p1 GENE.S_Transcript_350698~~S_Transcript_350698.p1 ORF type:5prime_partial len:113 (+),score=12.06 S_Transcript_350698:1-339(+)
LLGSNEAFENACVEFDEVNLKPTYKILWGVPGLSQNSLCSACEFLTSWPALPLLSLMILLSIDSMHYSVLVKCLIIVYSIDMGCMLGRFMVHVFSTFLTFLLFRSSPTSPFT*

Click here to download the sequence:
Link to NCBI Protein BLAST