Transcript Information: S_Transcript_350700.p1


Annotated TAIR IDAT5G54090.1
Annotated Gene NameDNA mismatch repair protein MutS, type 2
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21948283-21952550 | Reverse length=796
E-Value1.5E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.46494292647732
Condition 2: 8 Hour
Replicate 10.35840992129635
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_350700.p1 GENE.S_Transcript_350700~~S_Transcript_350700.p1 ORF type:5prime_partial len:119 (+),score=12.98 S_Transcript_350700:1-357(+)
CTCCTGGGCAGCAATGAAGCCTTTGAGAACGCATGTGTGGAGTTTGATGAAGTCAACTTGAAGCCAACTTATAAGATTCTTTGGGGAGTTCCAGGTCTCTCTCAAAACTCTCTATGTTCAGCTTGTGAATTTCTCACATCTTGGCCTGCTTTACCTCTGTTGAGTTTGATGATCTTATTGTCCATAGATTCCATGCATTATTCTGTTCTTGTTAAGTGTTTGATCATTGTATATTCAATTGATATGGGATGCATGCTAGGAATGTTTATGGTGCATGTCTTTATTGCTTTCCTTAAGACTTTGCTCTTCAGATCCAGTCCAACATCCCCCCTTTCACATAAAATGCTAATGTTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_350700.p1 GENE.S_Transcript_350700~~S_Transcript_350700.p1 ORF type:5prime_partial len:119 (+),score=12.98 S_Transcript_350700:1-357(+)
LLGSNEAFENACVEFDEVNLKPTYKILWGVPGLSQNSLCSACEFLTSWPALPLLSLMILLSIDSMHYSVLVKCLIIVYSIDMGCMLGMFMVHVFIAFLKTLLFRSSPTSPLSHKMLML*

Click here to download the sequence:
Link to NCBI Protein BLAST