Transcript Information: S_Transcript_350704.p1


Annotated TAIR IDAT5G54090.1
Annotated Gene NameDNA mismatch repair protein MutS, type 2
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21948283-21952550 | Reverse length=796
E-Value5E-34
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2177501029317
Replicate 21.3482815840703
Replicate 32.868870057449
Condition 2: 8 Hour
Replicate 13.5542317195222
Replicate 24.2257936319484
Replicate 33.1973771407472
Condition 3: 24 Hour
Replicate 14.7330580896287
Replicate 23.3995717364521
Replicate 31.1209797513385


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_350704.p1 GENE.S_Transcript_350704~~S_Transcript_350704.p1 ORF type:5prime_partial len:180 (-),score=37.74 S_Transcript_350704:174-713(-)
CTGTTTGATGAAGTCAACTTGAAGCCAACTTATAAGATTCTTTGGGGAGTTCCAGGTCGTTCAAATGCAATAAATATAGCAGAAAGGTTAGGATTTCCAAAATCAATTTTATGTAATGCTCGTCAACTGTATGGAGTTGCCAGTGCGGAGATAGATGAGGTCATATATGAATTGGAGAAGTTCAAGCAAGATGTTGAGGAACATGTATACGAAGCACACAACCATCTGATGGTCTCAAGAGAACTTCATGAGAAGGTACTTAATGTCCAAAGAAAGCTTGCTGAGCATAGTTCTGATCTTAGTTATACAAAGATGCAACAAATATCAGAGTATGCATCTAGGGCTCGTTCAACTCTTCACAGGAAGATGCAGCTATATCGTGCATCTGCATGCCAGATTCCCAAGCCCACAGGAACAGAACTGAGTGTGCCAGGAGAACCAGTTAACAGCCACAAGCATGCAGCTGGTGATAATGCTTCCAGCATTTTATGGCCTCGGGTGTGTGAGACATTGAAAACTCCACGCATAAAACGGTGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_350704.p1 GENE.S_Transcript_350704~~S_Transcript_350704.p1 ORF type:5prime_partial len:180 (-),score=37.74 S_Transcript_350704:174-713(-)
LFDEVNLKPTYKILWGVPGRSNAINIAERLGFPKSILCNARQLYGVASAEIDEVIYELEKFKQDVEEHVYEAHNHLMVSRELHEKVLNVQRKLAEHSSDLSYTKMQQISEYASRARSTLHRKMQLYRASACQIPKPTGTELSVPGEPVNSHKHAAGDNASSILWPRVCETLKTPRIKRW*

Click here to download the sequence:
Link to NCBI Protein BLAST