Transcript Information: S_Transcript_351117.p1


Annotated TAIR IDAT5G52450.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21289042-21291749 | Reverse length=486
E-Value4.7E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.1317503774163
Replicate 211.184608595129
Replicate 39.8617408224809
Condition 2: 8 Hour
Replicate 114.365019866402
Replicate 213.516325219835
Replicate 313.618458192071
Condition 3: 24 Hour
Replicate 117.142165516925
Replicate 212.433618850913
Replicate 315.938930839344


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_351117.p1 GENE.S_Transcript_351117~~S_Transcript_351117.p1 ORF type:complete len:144 (-),score=30.61 S_Transcript_351117:354-761(-)
ATGGACAAACAAGATGCAATTGAAGGAGCATCATTAGTTTTGCCTCTAAGCACACCACTAATCCAAGACCAACAGCATCAGATTGAAGAATCAAATGGTGATGAAGTTGATGATTATCATGATGTAAAGCTCATTAACAAATGGGGAATTAATGATTTTGGGGAAGAAGCTAAGAAACAAGTATGGCTAGCAGGTCCATTAATATTAGTTGGGCTCTTAACATATTCATTGCATATAATATCTCTGATGTTTGTTGGTCATCTTGGGGAGTTGACTCTTTCTGGTGCTTCTATGGCCACTTCCTTTGCTTATGTCACTGGTTTCAGCTTCTTGGTTAGTTTCACCTTCACCTCTTTCTTTGTTGGTCTTGCTTCATACATGTATACATTAAACTTTAATTGCACCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_351117.p1 GENE.S_Transcript_351117~~S_Transcript_351117.p1 ORF type:complete len:144 (-),score=30.61 S_Transcript_351117:354-761(-)
MDKQDAIEGASLVLPLSTPLIQDQQHQIEESNGDEVDDYHDVKLINKWGINDFGEEAKKQVWLAGPLILVGLLTYSLHIISLMFVGHLGELTLSGASMATSFAYVTGFSFLVSFTFTSFFVGLASYMYTLNFNCT*

Click here to download the sequence:
Link to NCBI Protein BLAST