Transcript Information: S_Transcript_351255.p1


Annotated TAIR IDAT1G27880.1
Annotated Gene NameDEAD/DEAH box RNA helicase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:9708940-9713901 | Forward length=911
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2537174029421
Replicate 20.73227674120231
Replicate 30.94780656532423
Condition 2: 8 Hour
Replicate 11.1187838603207
Replicate 21.7485491977517
Replicate 31.4834369318242
Condition 3: 24 Hour
Replicate 10.37421641953909
Replicate 20.67942904083268
Replicate 30.78312557574772


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_351255.p1 GENE.S_Transcript_351255~~S_Transcript_351255.p1 ORF type:complete len:934 (+),score=181.17,Helicase_C|PF00271.27|1.2e+04,Helicase_C|PF00271.27|2.9e-19,DEAD|PF00270.25|7e-19 S_Transcript_351255:70-2871(+)
ATGGAATCTGATAGTGATTCAGATGGCTCTCATGTCTCCAACACCCCCCCAAGAAATCCAACACCTCCACCCCGAAAACCCATCTCAATTCCCAAACTTAAACAACCCCCTTCACATTCAAAACCCATCTCAAATAAACCCCCTCCAAAATCCTCAAAATCCGCAAAAACCCCACAAAACCCTCCTCAAAATCCAAACACTCTACACCCACCTTCTAATTCCACCATCCTTCCTTTTTTTTCCCTCCCAATTAAACGACCCATTTCCTCAAACCCTCCAATTTCAGGCCCCAATTCAATTAGGGCTGGTTTCTGTTCCTTCTCAAAGTCTAACTCCTTCTCAAAATTCCAGAAAAATGTTCTTAGCTTTGATGATTGTGAGAAGGATACAAATTTTCCATCTGGGTCTTTGTCAAAACCAGATTTTGAGGTCAATACTGATGATGGGGTTGTTCTCAGCTCAGAGAATAATTTAAAAAAAAGGGTTGTTAGGAAACCCTCTAATTTGATTGGATGTGGGTCTAGTTCTAGTTTCTTGCATGTTAAAAAACCCCCAAAAAATGAAGGGAATTTTGTTAAATTAAACATTAATGGGCATGGTAGGAGGTTCTCATTTAAGAGTAGGAAAAAGAATTGTAGCTCATCATCCTCTAGAAGAAGTTATAGAAGGTTTAAGGGGAGGGTAAAAGCTAGTAATGGGGTTGAAAATAACAAACATGATGAGGAAGATGGGTTAGTTTTAGAAACTAGTGAAAGGCAGGAAAAGGGTAAAATGTCAAAAGATAAGGTTGATTTGATAAGCAATACTGTTTCAGATGTTAGGAGTGAGGCATCAGATGAAAATTTGTTGAAATTGTTGAAACTTACACATGGGTATGATTTGTTTCGGGACGGGCAGTTGGAGGCTGTTAAGATGGTACTTGCTGGAAAAAATACTATGTTGGTTTTGCCTACTGGGGCTGGCAAGTCACTGTGTTATCAGTTGCCTGCCATTGTTTTTCCAGGGGTTACACTTGTTGTAAGCCCGTTAATGGCGTTGATGATTGATCAATTAAAACAGCTACCTTCTTTTGTGGATGGTGCTTTCTTGAGCAGTAGTCAGTCACTAGAGGAGATGTCTGAGACTCTAACTCTACTTCAAGAAGGAAGCATTAAGGTGCTTTTCGTTTCACCAGAGAGGTTTCTAAATGCAGAGTTCATGTCAATAATATCTTCTATCTCATTAATATCGCTGGTAGTGATTGATGAAGCTCACTGCATATCTGAATGGTCACACAATTTCCGGCCTTCATATATGAGGCTAAGGGCATCTCTACTTCGTGATAAACTCAACGTTCAATGTATTCTTGCTATGACTGCAACGGCAACTAGGAAAACCTTGGACGCCATTATGCATGCTTTGGACATCCCCTCAAGTAATTTGGTGCAGACTGTTCAGTTGAGAAACAATTTGCAGCTGTCTGTGTCTTCAAGTCGATATAACAAGATGAAGGACTTGATCACCTTGATGAAATCATCTCCATATTCTGAAGTTAAGAGCATCATTATTTATTGTAAATTTCAGTCCGAGACTGATATGATAAGCAAATATCTATGTGATAACAATATTCCTGCAATGAGCTATCACAGCGGTATGCTGACAAAGGATCGTAGTCGTGTCCAAGCAATGTTTTGCTCCAACAAAATTAGAGTGGTTGTTGCTACTGTGGCATTTGGAATGGGGCTTGACAAAAGTGATGTTGGAGCTGTCATCCATTACAGCTTGCCTGAAAGCTTGGAAGAGTATGTTCAGGAGATTGGACGTGCTGGACGGGATGGGAGGTTATCATTTTGCCACCTCCTCTTTGATGATGCCATTTATTTCAAACTACGCAGTCTTGCATACAGTGATGGTGTTGATGAATACGCAGTGAATAAGCTCATTGGTCAAGTTTTTAGCAATGAGGTGGGACTGAAGGGGGAAATTTGTTCATTGGTCAAAGAACCTGTATCTCGCAGATTTGACATCAAAGAAGAGGTGATTTTAACAATCTTAACACAGTTGGAGTTGGGTGAAGTGCAATATCTGCGTCTTCTTCCACAGATGAATGTCACTTGCAGCTTAAACTTTCACAAGACTCCTCCTATGGAGCTAGCTGCCAGGGATGCTGTTGTTGCAGGAATTTTGAACAAGTCTGAAACAAGACATGGGGTGCATGTTTTTGACATTCCTACTGTTGCAAATGCTATTGGTATTACAGCAACGGACTTAGTAAATCAGCTGCAGAACCTGAAGTTTACGGGGGAAATAACATATGAATTGAAGGATCCAGCATATTGCTATGTCATTGTGAATGTCCCTGGAGACTTGTGCTCCCTAGCTGCCAAGATCACAAAATGGTTGTCAGAAATTGAATGTTGTAAGGTCTGGAAATTAGATACAATTTTTCATGCTGCAACCTTCGCTGAAAAATCATGTGAACGGATGAATGGCTGTGAAGGTGCTCAACATACGACATGTTTGCAGAAGAAGATTTCGTATTATTTCAGTGAAGAAGATCAAAAGGATTTTCCCTCTAGGATGAACCAAAACAGCCCATTTTTGCGAGCAGATATAAAGGTCTTTGTGCAAAGTAACTCTGGAGCAAAATTCACACCGCGTGCTGTAGCAAGAATAATGCATGGCATTGCTAGCCCAGCTTATCCTTCTGCAACCTGGTCAAAGACTCATTTCTGGGGCAGGTATTCACATGTGGATTTTAAAGCAGTCATGGAGGCCGCAAAAGCTGAGCTCATGAATTTTGTTGGAAAGGATACAGCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_351255.p1 GENE.S_Transcript_351255~~S_Transcript_351255.p1 ORF type:complete len:934 (+),score=181.17,Helicase_C|PF00271.27|1.2e+04,Helicase_C|PF00271.27|2.9e-19,DEAD|PF00270.25|7e-19 S_Transcript_351255:70-2871(+)
MESDSDSDGSHVSNTPPRNPTPPPRKPISIPKLKQPPSHSKPISNKPPPKSSKSAKTPQNPPQNPNTLHPPSNSTILPFFSLPIKRPISSNPPISGPNSIRAGFCSFSKSNSFSKFQKNVLSFDDCEKDTNFPSGSLSKPDFEVNTDDGVVLSSENNLKKRVVRKPSNLIGCGSSSSFLHVKKPPKNEGNFVKLNINGHGRRFSFKSRKKNCSSSSSRRSYRRFKGRVKASNGVENNKHDEEDGLVLETSERQEKGKMSKDKVDLISNTVSDVRSEASDENLLKLLKLTHGYDLFRDGQLEAVKMVLAGKNTMLVLPTGAGKSLCYQLPAIVFPGVTLVVSPLMALMIDQLKQLPSFVDGAFLSSSQSLEEMSETLTLLQEGSIKVLFVSPERFLNAEFMSIISSISLISLVVIDEAHCISEWSHNFRPSYMRLRASLLRDKLNVQCILAMTATATRKTLDAIMHALDIPSSNLVQTVQLRNNLQLSVSSSRYNKMKDLITLMKSSPYSEVKSIIIYCKFQSETDMISKYLCDNNIPAMSYHSGMLTKDRSRVQAMFCSNKIRVVVATVAFGMGLDKSDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSFCHLLFDDAIYFKLRSLAYSDGVDEYAVNKLIGQVFSNEVGLKGEICSLVKEPVSRRFDIKEEVILTILTQLELGEVQYLRLLPQMNVTCSLNFHKTPPMELAARDAVVAGILNKSETRHGVHVFDIPTVANAIGITATDLVNQLQNLKFTGEITYELKDPAYCYVIVNVPGDLCSLAAKITKWLSEIECCKVWKLDTIFHAATFAEKSCERMNGCEGAQHTTCLQKKISYYFSEEDQKDFPSRMNQNSPFLRADIKVFVQSNSGAKFTPRAVARIMHGIASPAYPSATWSKTHFWGRYSHVDFKAVMEAAKAELMNFVGKDTA*

Click here to download the sequence:
Link to NCBI Protein BLAST