Transcript Information: S_Transcript_35134.p1


Annotated TAIR IDAT1G30010.1
Annotated Gene NameIntron maturase, type II family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:10513194-10515329 | Forward length=711
E-Value1.1e-320
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.1221676017502
Replicate 27.8773697722786
Replicate 38.5654548338061
Condition 2: 8 Hour
Replicate 19.487865427009
Replicate 211.23272735049
Replicate 39.5133490008285
Condition 3: 24 Hour
Replicate 15.5754723553399
Replicate 25.3419583771307
Replicate 35.1710467608815


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_35134.p1 GENE.S_Transcript_35134~~S_Transcript_35134.p1 ORF type:5prime_partial len:717 (+),score=123.22,RVT_1|PF00078.23|0.0075,RVT_1|PF00078.23|0.079 S_Transcript_35134:1-2151(+)
GCCGAGAAGCCTAGAGGGGCCGTCCGCCCGTGTCTTAGTCTGGTTCCATCGGGGAAGCCTGAAGGCTACAGAGTACAGATTGAGGCTGCGAAACTCAATAGCCTCATTTCCAGGAGCATGTCTTTGAGGACTTTCATCAAACACCTTCCATGCAATTTTCTTCTCTTAGCCCGCTACTCATCTCTTCACTCTCTTTCTTCTCTATCACCCCAACTACCAAACCCCCAAGACCAAGACCCATACACCTTAATGAAACAAGACCCAATTCAAATATGCTCAGAAATCTGGGTAAAATCCTTCTCAACCCCAAAGTCAAAGCCTTTCTCTAACCTCACTGGTTTCTTATCCAAATTTGACATCTGGGTCTTAGCCTACCAACGCTCTGTTGCTCATTTCACTGGTTCTTTCCCTTCAAGTAATGCCATATCTTTTCAAGCCCTTCAAGACCTTCTTTCTCTTAGAAATGCTGTTGTTAAGGGCCATTTCAAGTGGAACATGAAGGAGAATCCTTTCATTAGAAGCCGAACTGAGAAAAAACCCATCTCAAACAGGAAGTTTCAGAAGTTTCTAGAATCAGATGTTCAGCCTTTCCAAGACCATGTTGTGCAAGAGGTATTGCTTATGATTCTTGAACCCATTTTTGAGTCTAAGTTTTCATCAAAGTCTCATGCTTTTAGGCCTGGTAGAAATGCTCATACTGTGATTAGGACTATTAGGAGTAACTTTGCTGGGTTTGTTTGGTTTATGAGGGGAGATTTTAGTGGGGTTTTGGAAAATGTGGAAAAAAATTTGGTGATGGGTTGTTTAGAAAATGTGGTTAAGGATAAGAGAGTTTTGGGTTTGATTGATTTAGCTCTAAGAAAAAAGCCTACAAATGTTGGGTTGAAATGTTGTGGTGATGAGAAAAAAGGAAAAAAGGTCGGTGGGAAAAGTAGGAGGAAGTTTTTGAAGCCCAATGAGCCGAAACCCGACCCTTATTGGCTTAGAACGTTCTTTGATTTTGCTCCTGATGAGGCTGCAAAGGTGCCATGTTATGGATATTGTGGGATTCTTAGCCCTTTATTAGCTAATGTGTGTTTGAATGAATTGGATTGCATGATGGAAGAGAAGATAAACAAGTTTTTTAGGTCGAGTACTTCGGTTAATGATGGTTGTCATAACCCTTCTTGGCCTGAGTTTGTTCCTTCTAGTAGTGGGAAGGATGAAACAAAAAAGATGGATTACATTAGGTATGGTGGGCATGTCTTGGTAGGCGTTCGAGGATCTAGGGAGGATGTAGTGGAGCTTAAGGAGGAGTTGATAAGCTTTTGTGGGAGCAAACTAGGGATAACATTAGAGAGTTCGAAGATTGAGATTGAACATGTAAGCAGGGGAATTCAGTTTCTGGATCATGTTATTTGTCGTCGCGTGATATACCCTACACTGCATTACACAGGGACAGGTGGTAAAATTATCAGCAGGAAAGGTGTAGGAACTTTGCTTTCAGTTACAGCCAGCTTACCACAATGTATTCGTCGATTTAGGCATCTTGAATTGCTTAAAGGTGATAAGGATCCTGAGCCCTTGCCTTGTACTCCGATGCTTTATTCAAGTCAAGCTCATACAAATGCTCAGATGAATAAGTTCCTTGAGACCATGGCTGATTGGTATAGATATGCAGACAACCGTAAGAAAATTGTTGGGTTTTGTGCTTATGTGATCCGTAGCTCTCTGGCAAAGTTGTATGCTGCAAGGTATAAGCTTAAATCTCGTGCCAAGGTGTACAGTATGGCTTCCCGTGATCTCAGTCATCCTCTTAGAGAGAGGAGACACAACATGGCATCGGAGTATTCAGATCTCTTGAGGCTCGGTCTTGTTGATGTCATTGAAGGTGTTCAGTTTTCCCGTATGTCTTTGATTCCAAGTTGTGATTATACCCCATTTCCCCGGGCTTGGGTCCCTGAGCATGAACAAGTTTTGCTTGAATATGTCAAATTGCAAGACCCCAAATTATTTTCTGAATTGCTTACTTCGGTCAAAACAGAAGGGTTAACTCTTCCGCAAGATGAAATTTCGGAAACTGTGTGGGATTTTAAGATCCTTGGCATTTGGCAATTCGACACTGAATCAAGAAGGGATCTCAATGGTATGGATGGGGTACTGACATCGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_35134.p1 GENE.S_Transcript_35134~~S_Transcript_35134.p1 ORF type:5prime_partial len:717 (+),score=123.22,RVT_1|PF00078.23|0.0075,RVT_1|PF00078.23|0.079 S_Transcript_35134:1-2151(+)
AEKPRGAVRPCLSLVPSGKPEGYRVQIEAAKLNSLISRSMSLRTFIKHLPCNFLLLARYSSLHSLSSLSPQLPNPQDQDPYTLMKQDPIQICSEIWVKSFSTPKSKPFSNLTGFLSKFDIWVLAYQRSVAHFTGSFPSSNAISFQALQDLLSLRNAVVKGHFKWNMKENPFIRSRTEKKPISNRKFQKFLESDVQPFQDHVVQEVLLMILEPIFESKFSSKSHAFRPGRNAHTVIRTIRSNFAGFVWFMRGDFSGVLENVEKNLVMGCLENVVKDKRVLGLIDLALRKKPTNVGLKCCGDEKKGKKVGGKSRRKFLKPNEPKPDPYWLRTFFDFAPDEAAKVPCYGYCGILSPLLANVCLNELDCMMEEKINKFFRSSTSVNDGCHNPSWPEFVPSSSGKDETKKMDYIRYGGHVLVGVRGSREDVVELKEELISFCGSKLGITLESSKIEIEHVSRGIQFLDHVICRRVIYPTLHYTGTGGKIISRKGVGTLLSVTASLPQCIRRFRHLELLKGDKDPEPLPCTPMLYSSQAHTNAQMNKFLETMADWYRYADNRKKIVGFCAYVIRSSLAKLYAARYKLKSRAKVYSMASRDLSHPLRERRHNMASEYSDLLRLGLVDVIEGVQFSRMSLIPSCDYTPFPRAWVPEHEQVLLEYVKLQDPKLFSELLTSVKTEGLTLPQDEISETVWDFKILGIWQFDTESRRDLNGMDGVLTS*

Click here to download the sequence:
Link to NCBI Protein BLAST