Transcript Information: S_Transcript_351912.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value5E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9468032577771
Replicate 21.2645339414563
Replicate 30.70933600321541
Condition 2: 8 Hour
Replicate 11.4956721715636
Replicate 20.74235395184613
Replicate 31.97726188191
Condition 3: 24 Hour
Replicate 10.56012521770754
Replicate 20.82040946882706
Replicate 31.1222478279803


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_351912.p1 GENE.S_Transcript_351912~~S_Transcript_351912.p1 ORF type:complete len:1326 (+),score=262.94,RVT_1|PF00078.23|1.3e-47,zf-RVT|PF13966.2|4.4e+02,zf-RVT|PF13966.2|5.2e-16,RVT_3|PF13456.2|3.7e+03,RVT_3|PF13456.2|4.4e-11,Exo_endo_phos_2|PF14529.2|1.7e-07,Exo_endo_phos|PF03372.19|6.6e-06 S_Transcript_351912:670-4647(+)
ATGCTTTTGGAAACTAAAGCCATTACAGTTCTTAGGGGTTTGGGGTTTGACTTTATTGAATGCTCTTCTGTTGCTGGTAGATCTGGTGGTCTTGCGTTGATGTGGAACAAGAATAGCGGTGCTGAACTAATAGTGAAAACTGATCAAATTTATGTCCTGAGGGTTGTTGATCAGGGTAGGAATGTTACTTGGTTCTTATGCTGTGTTTATAGATCTCCAAATCATGGGGATAAAAATGCTTTTTGGGAGGCGCTTGATTCTCTTATTAGGTTTTTCAATGGGCCTATGTGTATTATTGGGGATTTCAACGACATCCTGGATAGCCATGAAAAGTGGGGTGGGAAAATTGGAAGTAGCTCTTCTAATGGTGGACTCAAAAATCTTGTGAATACTCATGGTCTGTTGGATGTGGGTTTTTCTGGTAATCCATATACATGGTTCCGGAGAAGAGGGGATAGAGTGGTTTTGAAGGAAAGGCTGGATCGTGCTTTATGTACAGATTCTTGGAGGGTTCTGTTTGAAAATGCCTCAGTGCTTCATACAGCCGCCATTAAATCGGACCATTCTCCTATTGTTCTGAAATGTTTCGGAGATTCAGGGAGGGGTCCTACCCCCTTCAGATTTGAAGCTATGTGGGTTAGAGATAGGTCATGTGAGGAGGTGGTGAAAGAGGCTTGGCAGGAGGATATAAGGGGCTCCTTTGGCTTTAGGCTGAAACACAAGCTCAAGGTGACAAAAGTGAAGCTTAAAGATTGGAATCAAACTCATTTTGGAAACATCAAGATGAAAATTAGTAAAGTGGTGAAACAGATTGAGGATTTGCAGCAGGATACTTCTGGTAGAATTAGTGTGGAGGATGAAAAAAACTTGGTCCAAGAACTTACGGAACTTTACGCCAGGGAAGCAACTATGTATAGACAGAAGTCCAGAATTTCACACTTAAAAGAAGGGGACCTCAATACAAAATACTTCCATTTGTCTACTTTACAGCAGAGGAGGAGAAATTGTATTGATAGCCTGAAATTGGAGGATGGCAGCTGGGTTTATAGTGACCAAGAGATAGGAAGAGCATTTGCTGAGTACTTCCAAACCCTGTTTGCATCCTCTGAACCTCCTGAAGCTGATATCAACAATTTGTATGATGTTGTGATTACTGAGGAGAGTAACTCATTCCTCTGTGCTACCCCAGATGAGGAGGAGATTATCGATACCGTCAAGTCTATGGGTGCAACTAAGGCCCCTGGACCCGATGGTTTCCCTCCTATGTTCTATCAACAATTCTGGGAGACTGTGAAAGGTGACGTGATTAGCATGGTGCAAGCTTTCTTCCATTCTGGTTTTATGTTCAAGGAATTGAACCATACTTTTATCACTCTAGTGCCAAAATCAGACAAGGCAATGAAGGTAACAAACTTTAGGCCCATTTCATTATGCAATGTTTCTTACAAAATTATTTCTAAGATTCTTGCTAATAGGCTAAAATCTGTACTGAATGATATTGTGAGTCCTTTTCAGTCTGCTTTTATTCCCGGCCGGTTCATCACAGATAATTCAATCATGATTAATGAGGTTCTACATTGCATGGCTAAAAGCAACTCTAAGGAGGGGCTCATGGCCATCAAAGTTGATATGGCCAAAGCTTATGATAAGATTGAGTGGTGTTTTCTGCTCCAAGTCCTGAGGGCATTGGGTTTTGATGATAAATTTGTGAATTTGGTGGAGCAGTGTATTTCTACCCCTACTTATTCAATGCTGATCAATGGTAGGCCCCAAGGGTTGCATAAACCTAGGAGGGGGATTAGGCAGGGGGATTCTTTATCTCCCTTCCTGTTTGTGATAGCTATGGATGCTTTTTCTAGGCTAATCCAAAGTAAACATAATGAGGGTAAGATCAAAGGGATTACAATTGCTAGAGAGTGCCCAGAAATTACTCATCTTCTATATGCTGATGATCTGGTACTCTTTAGTAGAGCGAATCCCCAAAATGCTATTGAGATTAAGGAGGCTCTGGAGACTCTTGAGATGTGGAGTGGTTTGAGTGCTAATAAGCATAAATCTGGCTTGTTTTTCAGCAAGAGAACTAAGCGAGAGAATATGTTTGTAGTCAAAAGAATTCTGCAGTTCAGGGAAATGGACAAAGATGCTACTTATCTTGGCCTTCCCTTCTTTAGAAAAGAAACTAGAACCAAGAGATTTAATTATATCAAAAATAGATTAAATGCTAGGTTGGAAGGATGGCAGGCCAAACATATGTCTTATGCAGCAAGGGCCACCTTAATCCAGTCAGTTGCCTCTGCTATACCTGTATATGCTATGTCCAGTAACATTCTGACCAAGAAGCTTACGAAGGAATTAGATGCTCTGATGAGAAATTTTTGGTGGGGATTTAAAGATGGGAAAAAAGGGATCTATTTCCTAGCTTGGGAAAACATCTGTAGGCCTGTGGAGGAGGGAGGACTGAACCTGAGAATGATGCAAGATTACAATATGGCACTTCAAGCCAAGCTATTCTGGCAGTTGGCAAAGGAAGATAAGCTCTGGGTGCAGCAATGCCTGTTAAAATACTGTAGAAGGCATGACCCACTTTTTGTGGAACCGGAGTCCATTGACTCTCCTCAATGGAAGGAGATCCTAAAAGCGAGACCTCTGATTGAAAAGGGTCTATGTATGCTGGTGGGAAATGGAAGAAACATTAATATTTGGACTGACCCTTGGGTCCCATACATTGAGGGTTTCAAGCCCACACCCAAAAACCAAGGGGAGGGTGAAGTGTATAAGGTGGACGATCTCATTGAGAATGGTCTTTGGAAAAGGGAGCTGATTTTTAATCTATTTGAGGAAGAATCTGCAATAGCCATAATGAAAATCAGAATATCACAGGAAGAGCTAGGAGATGTGCCTGTTTGGACGAAAGAATCTCATGGTGAATTTACTGTCAAAAGCTGCTATAATGAGGTGGTTAAAGATAAAGATCTTACAAATGCTCAGATGGAAGGAAAATGGTGGAAAAAAATCTGGAAATTGAGAATCCCACAAAGGGTCAAAATGCTCATTTGGAGATGTGCCACTGGGTGTCTCCCTACTAAAGAAGAGATTCATAAACGAGTGGAGAATTATGACAACTGTTGTACTTTCTGCAAAGGTGCAACTGAAACATTTGGGCATTTATTTTTTCACTGTCAAGTTTCTAAACTTCTCTGGTTTAGTTGCTTGAATGTTAGAACAGAAGGGATGGTACAATGGGGGAGGGTACAGTGGATTAAGGCTATCTTGGATCCGGGGGAAGCCCTTAGAATTCCTAAAGGGACAGAAGATAATTTTAGCTCCAAGGCAGGTCTGATGCTGGACTGCATTTGGAAAGCTAGAAACTCTTGTTTGCATGAAGGAAAGGAGCCACAACCTTTAGAGATTATTAAAGAGTTCGACAAAAGATGGGTGGAAGTTCAAGTGATATTTGGCCACCAAGAAGAACTTACACAGAAACAAAAGAGTAAGGTGCAACAGATATCTTTTCAAGGGGAGAATCTCTTCTTTGTTGATGCTGCTGTTAGGCCAGAAGCATCTTTCTGTGCTTGGGTCTGTGTCGATAAGGAGATGAGAGTCAAGGAAGGTGGAGCAGAGAAGGTCGTCTCATCTGACTCGCAATATGCTGAAGTTATAGCTGTGTACCAAGCCCTGCTGATGATCAAGGAAAGAGGGTTGAGGAACAATTATATTTATAGTGATGCGAAGAGGGTTGTAGATCAGGTGACCAGAGGACACCACCTCAGCTGGGAATACAGAGCAGTGCTGAATGAGATAATAGATCTGTGTAAGGGTACTGACACTAAAGTCCGATATGTCCCGAGAAAAGGTAATTGGTCAGCTCATAGTATGGCAGCATGGGCAAGTTTTAGAAATTTTGTAGGCGTTTTGGATGAACCTGAACTTCTATTGTCTGTTAAGAAGAGAGATGTAAGCTTATTTCCAGTTGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_351912.p1 GENE.S_Transcript_351912~~S_Transcript_351912.p1 ORF type:complete len:1326 (+),score=262.94,RVT_1|PF00078.23|1.3e-47,zf-RVT|PF13966.2|4.4e+02,zf-RVT|PF13966.2|5.2e-16,RVT_3|PF13456.2|3.7e+03,RVT_3|PF13456.2|4.4e-11,Exo_endo_phos_2|PF14529.2|1.7e-07,Exo_endo_phos|PF03372.19|6.6e-06 S_Transcript_351912:670-4647(+)
MLLETKAITVLRGLGFDFIECSSVAGRSGGLALMWNKNSGAELIVKTDQIYVLRVVDQGRNVTWFLCCVYRSPNHGDKNAFWEALDSLIRFFNGPMCIIGDFNDILDSHEKWGGKIGSSSSNGGLKNLVNTHGLLDVGFSGNPYTWFRRRGDRVVLKERLDRALCTDSWRVLFENASVLHTAAIKSDHSPIVLKCFGDSGRGPTPFRFEAMWVRDRSCEEVVKEAWQEDIRGSFGFRLKHKLKVTKVKLKDWNQTHFGNIKMKISKVVKQIEDLQQDTSGRISVEDEKNLVQELTELYAREATMYRQKSRISHLKEGDLNTKYFHLSTLQQRRRNCIDSLKLEDGSWVYSDQEIGRAFAEYFQTLFASSEPPEADINNLYDVVITEESNSFLCATPDEEEIIDTVKSMGATKAPGPDGFPPMFYQQFWETVKGDVISMVQAFFHSGFMFKELNHTFITLVPKSDKAMKVTNFRPISLCNVSYKIISKILANRLKSVLNDIVSPFQSAFIPGRFITDNSIMINEVLHCMAKSNSKEGLMAIKVDMAKAYDKIEWCFLLQVLRALGFDDKFVNLVEQCISTPTYSMLINGRPQGLHKPRRGIRQGDSLSPFLFVIAMDAFSRLIQSKHNEGKIKGITIARECPEITHLLYADDLVLFSRANPQNAIEIKEALETLEMWSGLSANKHKSGLFFSKRTKRENMFVVKRILQFREMDKDATYLGLPFFRKETRTKRFNYIKNRLNARLEGWQAKHMSYAARATLIQSVASAIPVYAMSSNILTKKLTKELDALMRNFWWGFKDGKKGIYFLAWENICRPVEEGGLNLRMMQDYNMALQAKLFWQLAKEDKLWVQQCLLKYCRRHDPLFVEPESIDSPQWKEILKARPLIEKGLCMLVGNGRNINIWTDPWVPYIEGFKPTPKNQGEGEVYKVDDLIENGLWKRELIFNLFEEESAIAIMKIRISQEELGDVPVWTKESHGEFTVKSCYNEVVKDKDLTNAQMEGKWWKKIWKLRIPQRVKMLIWRCATGCLPTKEEIHKRVENYDNCCTFCKGATETFGHLFFHCQVSKLLWFSCLNVRTEGMVQWGRVQWIKAILDPGEALRIPKGTEDNFSSKAGLMLDCIWKARNSCLHEGKEPQPLEIIKEFDKRWVEVQVIFGHQEELTQKQKSKVQQISFQGENLFFVDAAVRPEASFCAWVCVDKEMRVKEGGAEKVVSSDSQYAEVIAVYQALLMIKERGLRNNYIYSDAKRVVDQVTRGHHLSWEYRAVLNEIIDLCKGTDTKVRYVPRKGNWSAHSMAAWASFRNFVGVLDEPELLLSVKKRDVSLFPVE*

Click here to download the sequence:
Link to NCBI Protein BLAST