Transcript Information: S_Transcript_351984.p1


Annotated TAIR IDAT5G58610.1
Annotated Gene NamePHD finger transcription factor, putative
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:23686771-23691053 | Reverse length=1065
E-Value3E-70
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.81092247531021
Replicate 22.322398900791
Replicate 32.8609230489796
Condition 2: 8 Hour
Replicate 15.6710179236697
Replicate 25.7633848296249
Replicate 35.255153564663
Condition 3: 24 Hour
Replicate 13.2071435595609
Replicate 24.0807416965722
Replicate 34.2618967000335


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_351984.p1 GENE.S_Transcript_351984~~S_Transcript_351984.p1 ORF type:internal len:361 (-),score=54.77,Jas|PF16135.1|6.1e+03,Jas|PF16135.1|2.9e-19,PHD|PF00628.25|3.3e+03,PHD|PF00628.25|1.9e-08,PHD|PF00628.25|0.0022 S_Transcript_351984:1-1080(-)
GAGTTTACGCATGGATTGAAGAATGGGGGGCGGCAGTGCTCCAGAAGATTGAGCACCAGCTTCTTATCAAAGAAAAGAAAAGCCTTGAGTAGAGTAAGGCGCACCTCAGATGGTAACAAGTTGACTCGAGTGCTGCGGTCGAGTAAAAGAGTAAGGCAGGCAGGGCCTGTCACTTCGTCTCAAGCTCCTCGGACAGTACTTTCATGGTTGATTGACCATGATGTGTCTTTGGCTAGGACAAAAATAATTTACCGTAGAGAAAGGGATGCAAAGGTAGTAGCTGATGGACGAATAACTCGTGATGGAATAAAGTGCAATTGCTGTGGAGAGGTGTTCTCTCTTAGCAGCTTTGGAGCTCATGCCGATAACAATTACCACCGACCAGCAGCAAATCTATTTTTTGAAGATGGGAGGTCTCTTTTGGAATGCCAAATGCAAATGATACGTCAGACTTCCAGACACTCCTCCAGAGAACTGGTTGATAGGGCTATGGGAGATCATGAAAGCTGGAATGATCATGTTTGTTCGATTTGTCATTATGGTGGAAAATTAATTTTATGTGATAAGTGTCCGTCCTCATTTCATGCAAACTGCCTCAATCTGCAGAAAATTCCTGAAGGTGATTGGTTCTGTCCGTCATGCTGTTGCGCAATTTGTGGTGAAAGCCAATATGATGTCAGTATGGAATTTACTGGGAAAAGCGTCCTCTCTTGCCAGCAATGTGAGAGGCAATATCATGCTCAATGTATAAGAGACCGGGAAATGATTAAGTTGGATGTTCGTCCTATGGAAAATTGGTTTTGCTGTAAAATGTGTGAAAAGGTACACTGGGGTCTCCAGCAGCTTCTTGACAAACCCATTCTTGTTGGTCAGAACAATTTGACCTGGACATTGATGAAACCAATGAACTATGACATCAGTGATCAAGATGATTGTGATATTGTCACCGTAGCAGACAATTATAGCAAGCTTAATGTTGCTCTTGAAGTGATGCATGAATGTTTTGAGCCTGTGAAAGAACCTCTAACAAGGCGAGATCTTGTTGAAGATGTTGTCTTCAGCAGAAGTTCTCATCTTAAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_351984.p1 GENE.S_Transcript_351984~~S_Transcript_351984.p1 ORF type:internal len:361 (-),score=54.77,Jas|PF16135.1|6.1e+03,Jas|PF16135.1|2.9e-19,PHD|PF00628.25|3.3e+03,PHD|PF00628.25|1.9e-08,PHD|PF00628.25|0.0022 S_Transcript_351984:1-1080(-)
EFTHGLKNGGRQCSRRLSTSFLSKKRKALSRVRRTSDGNKLTRVLRSSKRVRQAGPVTSSQAPRTVLSWLIDHDVSLARTKIIYRRERDAKVVADGRITRDGIKCNCCGEVFSLSSFGAHADNNYHRPAANLFFEDGRSLLECQMQMIRQTSRHSSRELVDRAMGDHESWNDHVCSICHYGGKLILCDKCPSSFHANCLNLQKIPEGDWFCPSCCCAICGESQYDVSMEFTGKSVLSCQQCERQYHAQCIRDREMIKLDVRPMENWFCCKMCEKVHWGLQQLLDKPILVGQNNLTWTLMKPMNYDISDQDDCDIVTVADNYSKLNVALEVMHECFEPVKEPLTRRDLVEDVVFSRSSHLN

Click here to download the sequence:
Link to NCBI Protein BLAST