Transcript Information: S_Transcript_352243.p1


Annotated TAIR IDAT1G15170.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:5220690-5222756 | Forward length=481
E-Value2.2E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.62374221644954
Replicate 20.34473108683617
Replicate 30.43225162695939
Condition 2: 8 Hour
Replicate 10
Replicate 20.17478006749786
Replicate 30.66612023765567
Condition 3: 24 Hour
Replicate 10
Replicate 20.35412205588043
Replicate 30.39409444382994


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_352243.p1 GENE.S_Transcript_352243~~S_Transcript_352243.p1 ORF type:3prime_partial len:128 (+),score=21.10,MatE|PF01554.14|1.5e-21 S_Transcript_352243:117-497(+)
ATGGAAGAGAAGTTGTTAGTGAAGAAGGAGGAGGAATCAGAAACTAGATCATGGAGAGTAATAGGAAGGGAGGTGAAGAGGGTAAGTTGGTTGGCATGTCCAATGGTGGGAGTAATGTTATCTCAATACCTTCTGCAAGTCATTTCCAATATGATGGTTGGTCATCTTGGTAAGCTCGCTCTCTCCAGCAGTGCCATCGCCATTTCCCTTGCTGGGGTCACCGGCTTTAGCTTCATGCTAGGAATGGCAAGTGCATTGGAGACTCTAAGTGGGCAAGCATATGGAGCAAAACAATACAAGAAACTAGGAACACAAACATACACTGCAATTTTCTGCTTAACATTAGTATGCATTCCCCTCTCCATATTGTGGATATACATG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_352243.p1 GENE.S_Transcript_352243~~S_Transcript_352243.p1 ORF type:3prime_partial len:128 (+),score=21.10,MatE|PF01554.14|1.5e-21 S_Transcript_352243:117-497(+)
MEEKLLVKKEEESETRSWRVIGREVKRVSWLACPMVGVMLSQYLLQVISNMMVGHLGKLALSSSAIAISLAGVTGFSFMLGMASALETLSGQAYGAKQYKKLGTQTYTAIFCLTLVCIPLSILWIYM

Click here to download the sequence:
Link to NCBI Protein BLAST