Transcript Information: S_Transcript_352303.p1


Annotated TAIR IDAT1G54380.1
Annotated Gene Namespliceosome protein-related
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:20298287-20300899 | Reverse length=515
E-Value5E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.10506090265483
Replicate 30.043911276389525
Condition 2: 8 Hour
Replicate 10.15232421655095
Replicate 20.79899459427595
Replicate 30
Condition 3: 24 Hour
Replicate 10.10402325471712
Replicate 20
Replicate 30.1201049733577


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_352303.p1 GENE.S_Transcript_352303~~S_Transcript_352303.p1 ORF type:5prime_partial len:420 (+),score=66.61,SIP1|PF04938.8|5.2e-18 S_Transcript_352303:1-1260(+)
AAAATGATTCGTGAATTTACTGGTGGGTGTGAGGCTGTTGTACCGTCTAAAGATCTGAGGCAGATCATTCAACATATAGAGAAAACCAATTCTGAAGCTGCTTCATTTGACATGAAAGATGGCACTTTGTCTATCAAAATTGGCGGAAAAGAATGGGCTTATAAATGTCTCTACACGGACAAAAATCTTACCAGGTTAGATATGCTTCTGCCTCAGCAGTCTCACTGTGAATCCTTGAGGAAGGCATCGTTTCTCACAGAAAGAATCCATTGGCGCCTTGCAGTCAATCCATTTAAGTGCATAATGTTGAAGTTCAACATCCAAGAACTCGGGTTTTTGTGTTATATTATAGGGAAAAACCAGGCTCTTCCCAAATTTGAACTAGGAAAGCCAAGCAGCTCTGATATTAGTCCAGCCATGGACAAATCTGTGAAAGAGCAAAGCAGCAGCTTGGTTACTGATGAACAAAATGTGGAACCAGGACAGCAAAGAAGCAGCCTGGTTAGTGATGAACAAAACATGGAACCCGGAGAGCAAAGCAGCAGCCTGGTTACTGATGAACAGACTGTCAAACCAGGAGAGCAACGAAGCAGCTCGGGTACTGATGAACAAAATGTAGAACCAGGGGAGGAAAGAAGCCATGCTCAAGTCACGTACCCGGGTACTGATGAACAAAATAAGAAATCAGGAAGCCGAAAAGTTGAATTCAACAAGGAGCAGATGGTTGACATTGACATGTCCTCTCTTTCTGTTATTAAGAAGCATCCGCTTATTCAGCTATGGAAGACTAGGGAACACCTCGTTATTTCAAGTTTTAGAGAGTTGAGACAGGCATTACAAAACCTTGATGAGACCCATGTTCAAAATCCTGACCCGCTATCAATTACGTTTCGCTCATTGTCAAGTACTATACACTGGTTTTGTATGGATTTTTTAACAGTGAGGTATCTTGAATTACCAACATGTGGTCCACTCTTAGCCAATGCCCGGGGCTTAGATCCAGCGGAACGGGTTGATAAGATCAGAGAGGGCATAAGGTCGATACACTATCACAACAGTTTCCCGCACGGATTTACTGTGCTCTTCGCTCTTTGTGCTGTAATTGATACTCCCTTGGATGCTGAAACCACTTCATCTCTCCGCCGTCTACTTGTAGACTGTGCTACGTTACTAGCTAAAAAATCTTACTGGGATGAAGAGGCCATAATGCTGAATATTCTGTTAACAATCTTGGAGAAAGTTTTTGGTATTTTAGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_352303.p1 GENE.S_Transcript_352303~~S_Transcript_352303.p1 ORF type:5prime_partial len:420 (+),score=66.61,SIP1|PF04938.8|5.2e-18 S_Transcript_352303:1-1260(+)
KMIREFTGGCEAVVPSKDLRQIIQHIEKTNSEAASFDMKDGTLSIKIGGKEWAYKCLYTDKNLTRLDMLLPQQSHCESLRKASFLTERIHWRLAVNPFKCIMLKFNIQELGFLCYIIGKNQALPKFELGKPSSSDISPAMDKSVKEQSSSLVTDEQNVEPGQQRSSLVSDEQNMEPGEQSSSLVTDEQTVKPGEQRSSSGTDEQNVEPGEERSHAQVTYPGTDEQNKKSGSRKVEFNKEQMVDIDMSSLSVIKKHPLIQLWKTREHLVISSFRELRQALQNLDETHVQNPDPLSITFRSLSSTIHWFCMDFLTVRYLELPTCGPLLANARGLDPAERVDKIREGIRSIHYHNSFPHGFTVLFALCAVIDTPLDAETTSSLRRLLVDCATLLAKKSYWDEEAIMLNILLTILEKVFGILD*

Click here to download the sequence:
Link to NCBI Protein BLAST