Transcript Information: S_Transcript_352304.p1


Annotated TAIR IDAT1G54380.1
Annotated Gene Namespliceosome protein-related
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:20298287-20300899 | Reverse length=515
E-Value4E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.068590209369022
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.10992469235636
Replicate 20
Replicate 30.21975100623692
Condition 3: 24 Hour
Replicate 10
Replicate 20.05841188550605
Replicate 30.19501580725605


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_352304.p1 GENE.S_Transcript_352304~~S_Transcript_352304.p1 ORF type:5prime_partial len:388 (+),score=53.38,SIP1|PF04938.8|4.3e-18 S_Transcript_352304:1-1164(+)
AAAATGATTCGTGAATTTACTGGTGGGTGTGAGGCTGTTGTACCGTCTAAAGATCTGAGGCAGATCATTCAACATATAGAGAAAACCAATTCTGAAGCTGCTTCATTTGACATGAAAGATGGCACTTTGTCTATCAAAATTGGCGGAAAAGAATGGGCTTATAAATGTCTCTACACGGACAAAAATCTTACCAGGTTAGATATGCTTCTGCCTCAGCAGTCTCACTGTGAATCCTTGAGGAAGGCATCGTTTCTCACAGAAAGAATCCATTGGCGCCTTGCAGTCAATCCATTTAAGTGCATAATGTTGAAGTTCAACATCCAAGAACTCGGGTTTTTGTGTTATATTATAGGGAAAAACCAGGCTCTTCCCAAATTTGAACTAGGAAAACCAAGCAGCTCTGATATTAATCCAGCCATGGACAAATATGTGAAAGCGCAAAGCAGCAGCCTGGTTACTGATGAACAGACTGTCAAACCAGGAGAGCAACGAAGCAGCTCGGGTACTGATGAACAAAATGTAGAACCAGGGGAGGAAAGAAGCCATGCTCAAGTCACGTACCCGGGTACTGATGAACAAAATAAGAAATCAGGAAGCCGAAAAGTTGAATTCAACAAGGAGCAGATGGTTGACATTGACATGTCCTCTCTTTCTGTTATTAAGAAGCATCCGCTTATTCAGCTATGGAAGACTAGGGAACACCTCGTTATTTCAAGTTTTAGAGAGTTGAGACAGGCATTACAAAACCTTGATGAGACCCATGTTCAAAATCCTGACCCGCTATCAATTACGTTTCGCTCATTGTCAAGTACTATACACTGGTTTTGTATGGATTTTTTAACAGTGAGGTATCTTGAATTACCAACATGTGGTCCACTCTTAGCCAATGCCCGGGGCTTAGATCCAGCGGAACGGGTTGATAAGATCAGAGAGGGCATAAGGTCGATACACTATCACAACAGTTTCCCGCACGGATTTACTGTGCTCTTCGCTCTTTGTGCTGTAATTGATACTCCCTTGGATGCTGAAACCACTTCATCTCTCCGCCGTCTACTTGTAGACTGTGCTACGTTACTAGCTAAAAAATCTTACTGGGATGAAGAGGCCATAATGCTGAATATTCTGTTAACAATCTTGGAGAAAGTTTTTGGTATTTTAGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_352304.p1 GENE.S_Transcript_352304~~S_Transcript_352304.p1 ORF type:5prime_partial len:388 (+),score=53.38,SIP1|PF04938.8|4.3e-18 S_Transcript_352304:1-1164(+)
KMIREFTGGCEAVVPSKDLRQIIQHIEKTNSEAASFDMKDGTLSIKIGGKEWAYKCLYTDKNLTRLDMLLPQQSHCESLRKASFLTERIHWRLAVNPFKCIMLKFNIQELGFLCYIIGKNQALPKFELGKPSSSDINPAMDKYVKAQSSSLVTDEQTVKPGEQRSSSGTDEQNVEPGEERSHAQVTYPGTDEQNKKSGSRKVEFNKEQMVDIDMSSLSVIKKHPLIQLWKTREHLVISSFRELRQALQNLDETHVQNPDPLSITFRSLSSTIHWFCMDFLTVRYLELPTCGPLLANARGLDPAERVDKIREGIRSIHYHNSFPHGFTVLFALCAVIDTPLDAETTSSLRRLLVDCATLLAKKSYWDEEAIMLNILLTILEKVFGILD*

Click here to download the sequence:
Link to NCBI Protein BLAST